| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3240 |
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| Symbol | |
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| ID | 8134212 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 3650646 |
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| End bp | 3651998 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 644866537 |
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| Product | Sel1 domain protein repeat-containing protein |
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| Protein accession | YP_003018796 |
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| Protein GI | 253689606 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATACA AAAAATTATT GATAGTCCTC TCGGCCTGCT GGCTGGCGTC ATGTCAGGCA
CCGGTCACGT CGCTGTCTGA AACGGAATTG GCGGCGTCAG CGAACCGCGG AAACGGTGAA
GCGCAATATC AGTTGGCAAA GACACTCGCC GCGCGCTCGC AGTACACCGA GGCGATGCAG
TGGATGCAAA AGGCGTCTGG CCTGTCTGAA CTCCCCGCTA ATACAGAAAT GCGCGCTGCT
GCCGCGCTTC AGGTTGGCGA TTGGTATCAG GCTGGACTGG GCGCGCCAAA GAACAGCCCG
TCTGCCCGCC AGTGGTGGAC AACGTCCTCG CGTCTGGGAA ATGGTGAAGC GGGGCATCGG
TTGGGGATGG ACTGTCAGGT TCAGCATCAA GGTAAGCTGG TCGCGGCCTG TTTGAGTGCG
TTTGAATCCT CTGCGGCGAA TGGCTATCCC CCCGCGCAGT TAATTGTTGC CCAGTGGCAC
GCGACACATA CTGGCGGTGA GAAAGAGGCC GTATCGTGGT TGTTGAAGGC TGCTGAACTC
GGCAATCGGG ATGCGCAGTA CCAATTGGCG CAGCGTTACG AGCAGGGCAA CGGCGTGGTG
ATCCGTCGCG ATCTGGCCGA ACGTTGGTAT TTCCGGGCGG CGACGTTGGG GCAGGCACAG
GCGCAGCTAT GGATGGCGCG GCATGAAGAC GGCGAAAATG CGCTGAACTG GTATCAAAAA
TCCGCGTCAT CAGGTGATGC CGAAGCGCAG CTTTGGCTGG GCAAGGCATA CCGCGAAGGT
AAGCGCTTAC CTTGGGATGA GCAAAAGGCG CGTTACTGGC TGGAGCGTGC TGCATCCGGT
GGATCGGGCG AGGCAGACTA TTTGATCAGT CAGAGCCAGA CAACCCATGA AAAACGTGAA
CAGTATCTGG TTCAGGCCTC CTCTGCAGGC TACATCCGGG CACAGCGCGA ACTGGGTGAA
CGCTTGTTTA AAGCGAACGA ATTTGCGCGT GCGCGTGAAG AATATGCTAA AGCGGCATCG
GCAGGAGATA CCGAGTCCCG TCTGGCTTAC GGTGAGATGT TGCGACTGGG ACAGGGCGGC
AAAGAGGATT ATGTTGAGGC GATGAAGCAG TACCGACTGG CGGCAAATGA CGGTAACCGC
ATGGCGCAGT ATCGGATGGG CATGATGCGT CAGGACGGGC TGGGAGCCTC TCGCAATCGT
ATTCATGCCT ACGCCTGGTA TGCGATGGCA GCGACGGAAG GGATGCCTGA GGCCATTCAT
GCGCGTAACG ATCTGGAGGC GACAATGCAG CCGGATGAAA TCAAAGCCGG ACAGCGGTTG
GCGATGCACT GGTCATCGGG GAAAACAGAG TAA
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| Protein sequence | MKYKKLLIVL SACWLASCQA PVTSLSETEL AASANRGNGE AQYQLAKTLA ARSQYTEAMQ
WMQKASGLSE LPANTEMRAA AALQVGDWYQ AGLGAPKNSP SARQWWTTSS RLGNGEAGHR
LGMDCQVQHQ GKLVAACLSA FESSAANGYP PAQLIVAQWH ATHTGGEKEA VSWLLKAAEL
GNRDAQYQLA QRYEQGNGVV IRRDLAERWY FRAATLGQAQ AQLWMARHED GENALNWYQK
SASSGDAEAQ LWLGKAYREG KRLPWDEQKA RYWLERAASG GSGEADYLIS QSQTTHEKRE
QYLVQASSAG YIRAQRELGE RLFKANEFAR AREEYAKAAS AGDTESRLAY GEMLRLGQGG
KEDYVEAMKQ YRLAANDGNR MAQYRMGMMR QDGLGASRNR IHAYAWYAMA ATEGMPEAIH
ARNDLEATMQ PDEIKAGQRL AMHWSSGKTE
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