Gene PC1_3214 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_3214 
Symbol 
ID8134186 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp3622981 
End bp3623475 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content55% 
IMG OID644866514 
Productcompetence damage-inducible protein A 
Protein accessionYP_003018773 
Protein GI253689583 
COG category[R] General function prediction only 
COG ID[COG1546] Uncharacterized protein (competence- and mitomycin-induced) 
TIGRFAM ID[TIGR00199] competence/damage-inducible protein CinA C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGGAAG CTGACATTCT GCGGTTAAGT GTTTTGGTCG GTGAAAAACT GAAGGCGCGT 
GGTGCTACGC TGACGTGCGC AGAATCCTGT ACTGGAGGTT GGCTGGCTAA GTCTATTACT
GATGTTGCAG GTAGTTCCGG CTGGTTTGAC TATGGCTTTG TGACATACAG CAATCTGGCC
AAGCAGCGTC TGGTGAATGT GAGCGCGGAG ACATTGGAAC GGCACGGTGC GGTGAGTGAA
GCTGTCGTCA ATGAGATGGC CGCAGGGGCT TTGCAGGCCG CCGATGCAGA TTTTGCCATA
TCAGTAAGCG GCATCGCCGG GCCCGATGGG GGGAGTGAAG AGAAGCCTGT CGGCACGGTA
TGGTTTGGCT TCACAGATAA ACAGGGCGGG GCATTTGCGC GGACAATCCG ATTCAGTGGG
GACAGAAACG CAGTTCGTCT GCAATCGGTC CACTTTGCGC TGCAAACGCT GCTCGACGCG
TTTCTGAAAA AATAA
 
Protein sequence
MTEADILRLS VLVGEKLKAR GATLTCAESC TGGWLAKSIT DVAGSSGWFD YGFVTYSNLA 
KQRLVNVSAE TLERHGAVSE AVVNEMAAGA LQAADADFAI SVSGIAGPDG GSEEKPVGTV
WFGFTDKQGG AFARTIRFSG DRNAVRLQSV HFALQTLLDA FLKK