| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3211 |
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| Symbol | alaS |
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| ID | 8134183 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 3618494 |
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| End bp | 3621121 |
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| Gene Length | 2628 bp |
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| Protein Length | 875 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644866511 |
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| Product | alanyl-tRNA synthetase |
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| Protein accession | YP_003018770 |
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| Protein GI | 253689580 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0013] Alanyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.277669 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAAGA GCACCGCTGA GATCCGTCAA GCGTTTCTCG ATTTTTTCCA CAGTAAGGGA
CACCAGGTTG TTGATAGCAG CTCTCTGGTG CCGAACAACG ATCCTACATT GTTATTCACC
AATGCGGGTA TGAACCAGTT CAAAGATGTG TTCCTCGGTC TGGATAAACG TAACTATGTC
CGAGCGACGA CCTCGCAGCG CTGTGTGCGC GCCGGTGGTA AACATAATGA CCTGGAAAAC
GTAGGTTATA CCGCACGCCA CCACACCTTC TTTGAAATGC TGGGTAACTT CAGCTTCGGT
GATTACTTCA AGCATGATGC GATTCGCTAT GCGTGGGAAT TACTGACGTC TCCCCAGTGG
TTCAACCTGC CAAAAGAGAA ACTGTGGGTA ACGGTATACG CAACGGATGA CGAAGCCTAC
GATATTTGGG CTGATGAAGT TGGCGTACCG CGCGAAAGAA TTATTCGTAT TGGTGATAAC
AAAGGCGGAC CTTACGCCTC TGATAACTTC TGGCAGATGG GTGAAACAGG GCCGTGTGGT
CCGTGTACCG AGATTTTCTT CGATCACGGT GAACACATCG CCGGTGGCCC GCCGGGAAGC
CCTGATGAAG ACGGCGACCG CTATATCGAA ATTTGGAACC TGGTGTTCAT GCAGTTCAAC
CGTCAGGTTG ATGGCACGAT GCTGCCGCTG CCGAAACCTT CCGTCGATAC CGGAATGGGG
TTAGAACGTA TTTCTGCCGT GTTACAACAC GTCAATTCAA ACTATGACAT TGATTTGTTT
AAAACGCTGA TTGAGGCAGT TGCTAACGCT GTCGGCACGA CGGATTTAAC CAATAAATCG
CTGCGTGTTA TCGCCGACCA TATCCGCTCT TGTGCATTCC TGATTGCGGA CGGCGTGACG
CCATCGAATG AAAACCGTGG TTATGTTCTG CGCCGTATCA TTCGCCGCGC TGCACGTCAC
GGTAATATGC TGGGCGCTAC GGATGCCTTC TTCTATAAAC TGGTTGCGCC GCTGATTGAA
GTCATGGGGC CAGCGGCGGC GGAGTTGAAA AAGCAGCAGT CGGTTGTTGA GCAAGCGCTG
AAGATGGAAG AAGAGCAGTT TGCCCGTACG CTGGAACGCG GCCTGTCTCT GCTGGACGAG
GAAATTAAAA ACCTGAAAGG GGATACGCTG GACGGCGAGA CGGCCTTCCG CCTGTATGAT
ACCTATGGTT TCCCTGTCGA TCTCACTGCG GATGTGTGCC GCGAGCGTGG CCTGAAAGTC
GATGAGGAAG GTTTTGAAGC GGCAATGACG GCTCAGCGTC AGCGCGCGCG TGAAGCCAGC
GGATTTGGTG TGGATTACAA CAGCCTTATT CGTGTGGATG AAAACACCCC ATTCTGCGGC
TATGAAAAAA CGCAGCAGCA AGCGAAGGTG ATTGCGCTTT ATCACAACGG AAACGCGGTT
GATCAGATTG CGGCAGGTGA TGAAGCGGTA GTGATCCTGA ACGAAACGCC GTTCTATGGC
GAATCCGGTG GTCAGGTTGG CGACCAGGGT GAACTGAAAA ACGCGGGCGT CAGCTTTGCC
GTTCAGGATA CGCAGAAATA CGGTCAGGCA ATCGGCCACG TCGGTAAACT GACGCAGGGT
ACGCTGCGTG TTAACGACAG TGTTGATGCA AACGTTGATA GCCAACGCCG CGATCGCATT
CGTCTGAATC ACTCTGCAAC GCACCTGCTG CATGCCGCGC TGCGTCAGGT TCTGGGCGAT
CATGTCGCGC AGAAAGGTTC TCTGGTTAAC GATAGCTATC TACGTTTTGA CTTCTCACAT
ACGGAAGCGA TGAAACCTGA GCAGATTCGT CAGGTTGAAG ATATCGTCAA TGCGCAAATC
CGCCGTAACC TTACCGTGCA AACGGATGTC ATGGCGCTGG ATGATGCGAG AGCGAAGGGC
GCGATGGCGC TGTTCGGCGA GAAGTATGAC GACCATGTTC GTGTTCTGAC GATGGGGGAC
TTCTCCATTG AACTGTGCGG CGGCACACAC GCCAGTCGTA CTGGTGATAT CGGCCTGTTC
CAAATCATTT CAGAATCAGG TACCGCAGCC GGGGTGCGCC GTATTGAAGC GACTACGGGT
GAAAATGCGC TTTCTGCGCT GCACCGTCAG AGTGACGTTC TGCAAGATAT CGCGCAACTG
CTGAAAGGGG ATAGTCACAA CCTGACAGAT AAGGTACGCT CTGTTTTAGA TCGTGCTCGC
GCGTTGGAGA AAGAGCTTCA GCAGTTGAAG GCTCAGCAAG CGGCGCAGGA AAGCTCGTCA
CTGTCTGGCA AAGCAAAAGA GGTTAGCGGC GTGAAGTTGC TGGTTACGCA ACTGGACAAC
GTGGATCCTA AGCTACTGCG CACGATGGTG GATGACCTGA AGAATCAGTT AGGGTCTGCT
GTTATTGTTC TTGGAACGGT GGCAGAAGGT CGGGTTAGCT TGATTTCTGG TGTAACGAAA
GATCTGACTG ACCGTGTCAA AGCTGGTGAA CTGATTGGGT TTGTTGCCCA GCAGGTTGGC
GGTAAAGGCG GTGGTCGCCC AGATATGGCA CAGGCTGGTG GTTCAGATGT GTCTGCACTG
CCTGCTGCGC TGGCAAGCGT TGAATCCTGG GTTGCTGCTA AGCTATAA
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| Protein sequence | MSKSTAEIRQ AFLDFFHSKG HQVVDSSSLV PNNDPTLLFT NAGMNQFKDV FLGLDKRNYV
RATTSQRCVR AGGKHNDLEN VGYTARHHTF FEMLGNFSFG DYFKHDAIRY AWELLTSPQW
FNLPKEKLWV TVYATDDEAY DIWADEVGVP RERIIRIGDN KGGPYASDNF WQMGETGPCG
PCTEIFFDHG EHIAGGPPGS PDEDGDRYIE IWNLVFMQFN RQVDGTMLPL PKPSVDTGMG
LERISAVLQH VNSNYDIDLF KTLIEAVANA VGTTDLTNKS LRVIADHIRS CAFLIADGVT
PSNENRGYVL RRIIRRAARH GNMLGATDAF FYKLVAPLIE VMGPAAAELK KQQSVVEQAL
KMEEEQFART LERGLSLLDE EIKNLKGDTL DGETAFRLYD TYGFPVDLTA DVCRERGLKV
DEEGFEAAMT AQRQRAREAS GFGVDYNSLI RVDENTPFCG YEKTQQQAKV IALYHNGNAV
DQIAAGDEAV VILNETPFYG ESGGQVGDQG ELKNAGVSFA VQDTQKYGQA IGHVGKLTQG
TLRVNDSVDA NVDSQRRDRI RLNHSATHLL HAALRQVLGD HVAQKGSLVN DSYLRFDFSH
TEAMKPEQIR QVEDIVNAQI RRNLTVQTDV MALDDARAKG AMALFGEKYD DHVRVLTMGD
FSIELCGGTH ASRTGDIGLF QIISESGTAA GVRRIEATTG ENALSALHRQ SDVLQDIAQL
LKGDSHNLTD KVRSVLDRAR ALEKELQQLK AQQAAQESSS LSGKAKEVSG VKLLVTQLDN
VDPKLLRTMV DDLKNQLGSA VIVLGTVAEG RVSLISGVTK DLTDRVKAGE LIGFVAQQVG
GKGGGRPDMA QAGGSDVSAL PAALASVESW VAAKL
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