Gene PC1_3208 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_3208 
Symbol 
ID8134175 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp3615596 
End bp3616024 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content51% 
IMG OID644866503 
Producthypothetical protein 
Protein accessionYP_003018767 
Protein GI253689577 
COG category[S] Function unknown 
COG ID[COG1238] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000592602 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGTGAGT TCTGGGCCGT TTTTTCTCTT TTCTGGAGTA GCCTGCTCAG TGCAACATTG 
CTGCCCGGCA GTTCGGAAGT ACTGCTGGTA ACATTATTGC TTGCTGACAG TGCCAAACCC
TACCTGTTGA TCGCTGTAGC GACGGTAGGA AATACGCTGG GCGGGTTAAC AAATATTATT
ATAGGGCGCT TACTCCCTCA GCCAAAACAA CAAGCTGGGT ATACGGTGGC CATGCGTTGG
TTACAGCGCT ATGGTTACGC TGCGCTGTTA TTTAGCTGGG TGCCGGTAGT AGGCGATTTA
TTGTGCGTGT TAGCGGGTTG GCTACGCATG CCCTGGGTGC AATCGGCGGT TTTCATTGGT
ATTGGAAAAG CGCTGCGGTA TATCGTATTG GCAGGTATAA CGTTACAGGG GATGGCGTGG
TGGTCTTAA
 
Protein sequence
MSEFWAVFSL FWSSLLSATL LPGSSEVLLV TLLLADSAKP YLLIAVATVG NTLGGLTNII 
IGRLLPQPKQ QAGYTVAMRW LQRYGYAALL FSWVPVVGDL LCVLAGWLRM PWVQSAVFIG
IGKALRYIVL AGITLQGMAW WS