| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3204 |
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| Symbol | |
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| ID | 8134171 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 3610896 |
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| End bp | 3612257 |
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| Gene Length | 1362 bp |
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| Protein Length | 453 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 644866499 |
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| Product | signal recognition particle protein |
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| Protein accession | YP_003018763 |
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| Protein GI | 253689573 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0541] Signal recognition particle GTPase |
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| TIGRFAM ID | [TIGR00959] signal recognition particle protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0069181 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTGAAA ATTTAACCGA TCGACTCTCG CGCACATTGC GCAACATCAG TGGCCGCGGG
CGGTTGACTG AAGACAACAT AAAAGAAACG CTGCGTGAAG TGCGTATGGC ATTGCTGGAA
GCCGACGTCG CGTTACCCGT GGTGCGTGAT TTTATCAATC GCGTGAAAGA ACGTGCCGTC
GGGCATGAAG TTAATAAAAG TCTGACGCCA GGCCAAGAGT TCGTCAAAAT TGTTAAGAAT
GAACTCGTCA GCGCCATGGG TGAAATCAAT GCCGAGCTGA ATCTTGCTGC GCAGCCGCCA
GCAGTTGTTC TTATGGCGGG TCTGCAAGGT GCGGGTAAAA CAACCAGCGT GGGTAAGCTG
GGTAAATTCC TGCGTGAAAA GCAGAAGAAA AAAGTGCTGG TCGTTTCTGC CGACGTTTAT
CGTCCTGCGG CGATTAAGCA GTTGGAAACG CTGGCAGAGC AGGTCGGGGT CGATTTTTTC
CCGTCAGACG TGCAGGAAAA GCCGCTTGCT ATTGTAGAAC GTGCCTTACA ACACGCTAAG
CTGAAATTCT ACGATGTATT GTTGGTGGAT ACCGCGGGTC GTCTCCACGT TGACGACGCG
ATGATGGACG AGATCAAACA GGTTCACGCG GCGATTAAGC CAGTTGAAAC GCTGTTTGTT
GTTGATGCCA TGACAGGGCA GGATGCGGCG AATACGGCGA AAGCCTTTAA TGAAGCGCTG
CCGCTGACTG GTGTGATCCT CACCAAAATT GATGGCGATG CTCGCGGCGG TGCAGCGTTG
TCTATTCGCC ATATTACCGG CAAGCCGATT AAATTCCTCG GTGTCGGTGA GAAAACCGAA
GCGCTGGAGC CGTTTTACCC TGAGCGTGTG GCATCGCGCA TTCTCGGCAT GGGTGATGTG
CTTTCACTGA TTGAAGATAT TGAAAGCAAG GTCGACCGTA CACAGGCAGA GAAGCTGGCG
AAGAAGCTGA AGAAGGGAGA TGGGTTTGAT TTGACCGATT TTCTGGATCA GCTCAAGCAG
ATGCGCAATA TGGGCGGCAT GGCGAGCATG ATGAGCAAAA TGCCCGGTAT GGGCCAACTG
CCTGATAATG TGAAATCGCA AATGGATGAC AAGGTGCTGG TACGTATGGA GGCGATCATT
AATTCAATGA CGCATCAGGA ACGTGCCAAA CCTGAGATCA TCAAAGGATC GCGCAAACGT
CGTATCGCGA TGGGCTCTGG CATGCAGGTG CAGGATGTAA ACCGTCTTCT GAAACAGTTC
GATGATATGC AGCGAATGAT GAAGAAGATG AAAAACGGCG GCCTGGCGAA AATGATGCGC
GGTATGAAAG GGATGATGCC ACCAGGATTC CCGGGGCGTT AA
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| Protein sequence | MFENLTDRLS RTLRNISGRG RLTEDNIKET LREVRMALLE ADVALPVVRD FINRVKERAV
GHEVNKSLTP GQEFVKIVKN ELVSAMGEIN AELNLAAQPP AVVLMAGLQG AGKTTSVGKL
GKFLREKQKK KVLVVSADVY RPAAIKQLET LAEQVGVDFF PSDVQEKPLA IVERALQHAK
LKFYDVLLVD TAGRLHVDDA MMDEIKQVHA AIKPVETLFV VDAMTGQDAA NTAKAFNEAL
PLTGVILTKI DGDARGGAAL SIRHITGKPI KFLGVGEKTE ALEPFYPERV ASRILGMGDV
LSLIEDIESK VDRTQAEKLA KKLKKGDGFD LTDFLDQLKQ MRNMGGMASM MSKMPGMGQL
PDNVKSQMDD KVLVRMEAII NSMTHQERAK PEIIKGSRKR RIAMGSGMQV QDVNRLLKQF
DDMQRMMKKM KNGGLAKMMR GMKGMMPPGF PGR
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