| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3152 |
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| Symbol | |
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| ID | 8134119 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 3573374 |
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| End bp | 3574432 |
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| Gene Length | 1059 bp |
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| Protein Length | 352 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644866447 |
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| Product | integrase family protein |
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| Protein accession | YP_003018711 |
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| Protein GI | 253689521 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAGTAA GAAAATTACC TAACGGGAAA TGGCTGTGTG AGTGCTATCC AAATGGGCGA
GACTCTCGGC GCATAAGAAA GACGTTTAAC ACAAAAGGTG AAGCTGAATC TTTTGAAACC
TACACCATGC GTGAGGTTGA AGACAAACCG TGGCTGGGTG AGAAAGAGGA TCGCCGTAAC
CTGAGTGAAC TTATTGAGCT TTGGAATAAT TTACATGGGC AGGCACTCAG CGCCAGCAAA
TCACGGATGG GTAAACTGCG TATCATCTGT AACGGGTTGG GTGACCCGGT GGCTTCTAAG
CTGACAGCGA AAGACTGGGC GCATTATCGA GATAAGCGCC TACGTGGAGA AATTGATAAC
GGCTACCATT CTGACCCCAA AATGTGGATA GCGAAGCCGA TCACAGTGAA CCGAGAACAC
CAATACCTTT ATGCCATGTT CAATGAACTG AAAAGGCTAG GGGAGTGGAC GTTACCTAAC
CCGTTAGAAG GAATGCGCAT CTTTAAAGAA GCTGATCGCG AAATGTCGTG GCTGACGACC
TCCCAAATCC AACAATTGCT GGATGCCTGT GAACGCTACG GAAAAATTTA CCTTACGCGG
ATTGTTAAAG TGTGTCTGGC GACAGGGGCA AGATGGAGTG AAGCAGAAGG GCTAACCCGT
TCTCAGCTAT CCCCTTACAA GTTGACGTTC TTCAAAACCA AAGGCAAGAA AAACCGGACG
GTGCCGATCC CGCGTTGGCT TCATGATGAG TTATCAGAAT TACAAGGGAA GATGTTCCAG
CCGTGCTATC AGGATTTTGT AAAGATGCTG GCCTTAACAA ACATCGAGCT TATTGAAGGG
CAAAACACCC ACGTTTTACG GCACACTTTT GCGTCACATT TTATGATGAA CGGCGGGAAC
ATTTTGGTGC TCCAGCGCAT TCTGGGGCAT GCCAATATTC GCGAAACGAT GCGGTATGCA
CACTTTGCCC CTGACCATCT GGAAGAAGCC GCCCACCTTA ACCCCTTAGC TGGTTACAAT
GGCGGCAAAG TGGCGGCAGA GAATAATAAA GGCTACTAA
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| Protein sequence | MSVRKLPNGK WLCECYPNGR DSRRIRKTFN TKGEAESFET YTMREVEDKP WLGEKEDRRN
LSELIELWNN LHGQALSASK SRMGKLRIIC NGLGDPVASK LTAKDWAHYR DKRLRGEIDN
GYHSDPKMWI AKPITVNREH QYLYAMFNEL KRLGEWTLPN PLEGMRIFKE ADREMSWLTT
SQIQQLLDAC ERYGKIYLTR IVKVCLATGA RWSEAEGLTR SQLSPYKLTF FKTKGKKNRT
VPIPRWLHDE LSELQGKMFQ PCYQDFVKML ALTNIELIEG QNTHVLRHTF ASHFMMNGGN
ILVLQRILGH ANIRETMRYA HFAPDHLEEA AHLNPLAGYN GGKVAAENNK GY
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