Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_3124 |
Symbol | |
ID | 8134085 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 3538264 |
End bp | 3538800 |
Gene Length | 537 bp |
Protein Length | 178 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 644866413 |
Product | hypoxanthine phosphoribosyltransferase |
Protein accession | YP_003018683 |
Protein GI | 253689493 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0634] Hypoxanthine-guanine phosphoribosyltransferase |
TIGRFAM ID | [TIGR01203] hypoxanthine phosphoribosyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGAAAC ATACCGTGGA AGTCATGATT TCTGAGCAGG AAGTGATGGC GCGGGTTACC GAACTGGGGC AACAGATCAG CGAACACTAC CGTGATAGCG GCAGCGATAT GGTGCTGGTA GGGCTATTAC GCGGATCGTT TATCTTTATG GCCGATTTAT GCCGGGCGAT CGACGTCCCT CACGAAGTGG ATTTCATGAC GGCATCCAGT TATGGCAGCG GTATGAACAG TACGCGCGAT GTGAAGATCC TGAAAGATCT GGATGAGGAT ATTCGCGGCA AAGATGTGTT GATCGTTGAA GACATCATCG ACTCAGGTAA TACGCTGAGC AAAGTACGGG AAATTCTGCA ACTGCGTGAG CCGAAATCGC TGGCTATCTG TACGCTGCTG GACAAACCAG AGCGCCGTGA AGTGGCAGTG AAGGTCGAGT GGGTTGGATT CTCGATTCCT GATGAGTTCG TCGTGGGTTA CGGCATCGAC TATGCTCAGC ACTATCGCCA TTTACCTTAC GTCGGCAAGG TTGTTCCGCA GGAATAA
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Protein sequence | MMKHTVEVMI SEQEVMARVT ELGQQISEHY RDSGSDMVLV GLLRGSFIFM ADLCRAIDVP HEVDFMTASS YGSGMNSTRD VKILKDLDED IRGKDVLIVE DIIDSGNTLS KVREILQLRE PKSLAICTLL DKPERREVAV KVEWVGFSIP DEFVVGYGID YAQHYRHLPY VGKVVPQE
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