| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3110 |
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| Symbol | mrcB |
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| ID | 8134071 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 3522510 |
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| End bp | 3524990 |
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| Gene Length | 2481 bp |
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| Protein Length | 826 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644866399 |
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| Product | penicillin-binding protein 1b |
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| Protein accession | YP_003018669 |
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| Protein GI | 253689479 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
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| TIGRFAM ID | [TIGR02071] penicillin-binding protein 1B |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTCGGG ATGACCGCGA ACCTATCGGA CGTAAAGGGA AAGCGCCAAA ACGTAAGCCT
GAACGCAAAC AGGCCATACG ACGTCGCAGG GATGACGACT ATGATGATGA TGACTATGAC
GATTATCAGG ACGACTATGA CGACGATGAT GACGACGACG GCGATGACAC CATGACGCGG
AAATCGCAGA GAAGACGGCG CTGGCTGGGG CTGGCTATCA AGCTGTTCCT GATCTTTGCC
GTCGCGATGG CAATCTATGG CGTGTATCTC GACAGCCAGA TCCGCAGCCG TATTGAAGGC
AAAGTCTGGC AGTTGCCCGC CGCCGTCTAT GGCCGTATGG TCAACCTTGA GCCGGGTATG
GCCTATAGCC AGAAAGAGAT GATCAGCCTG CTGGAAGGTA TGCAATACCG TCAGGTGAGC
CGCATTACCC GTCCAGGTGA ATTCAGCGTG CGCGGCAACA GCATCGACAT GCTGCGCCGT
CCGTTTGATT TCCCTGATGG AAAAGAAGGG CAGATTCAGG CGCGCCTGAC GTTTGCCAAC
GATCGTCTGT CGCAGATCCA GAATCTGGAT AATCAGCGCA ACTTCGGCTT TTTCCGTCTC
GATCCAAAAC TGATCACCAT GATGCAGTCA CCGAATGGCG AACAGCGTTT ATTCGTGCCG
CGTTCCGGCT TCCCCGATCT GCTGGTTGAT ACGCTGGTCG CGACCGAAGA CCGCCATTTT
TATGAACATG ATGGCATTAG CCTGTACTCG ATTGGCCGTG CGTTTTTAGC CAACATCACG
GCAGGACGCG CGGTACAGGG CGGCAGTACG CTGACGCAGC AGTTGGTTAA GAACCTGTTC
CTGACTAATG AGCGTTCGCT GTGGCGTAAA GCTAACGAAG CCTATATGGC GCTGATCATG
GATTATCGCT ACAGCAAGGA TCGTATCCTT GAGCTGTACC TTAACGAGGT GTACCTCGGT
CAGAGCGGTA ACGATCAGAT CCGCGGCTTC CCGCTTGCCA GCCTGTACTA TTTTGGTCGT
CCGGTGAATG AACTGAGTCT CGATCAGCAG GCGCTGCTGG TGGGCATGGT GAAAGGGGCG
TCGCTGTACA ATCCGTGGCG TAATCCGGAG ATTACGTTAG AGCGACGCAA TCTGGTGCTG
CGTCTGTTGC AGAATCAGCA GGTGATTGAT GCAGATCTGT ACAACATGCT GAGCGCGCGT
CCGCTGGGCG TCCAGCCGAA AGGCGGCGTC ATCAGCCCTC AGCCCGCGTT TATGCAACTG
GTGCGTCAGG AACTGCAACA GCGGCTTGGC GACAAGGTTA ACGATCTCTC CGGCGTGAAG
ATCTTTACCA CGCTCGATCC GGTCTCGCAG GATGCGGCAG AAAAAGCGGT AGAGGTCGGC
GTTCCGGCAC TGCGCGCAGG CCGTAACGTG AGCGATCTGG AAGCGGCGAT GGTGATTGTC
GATCGTTTTA GCGGCGAAAT TCGCGCGATG GTTGGCGGTT CTCAAACGCA GTACGCCGGG
TTTAACCGTG CGTTACAGGC GCGTCGTCCC GTCGGGTCGT TGGCGAAGCC GCCGACCTAT
CTGACCGCGC TGAGCCAGCC GGACACTTAT CGTCTGAACA CCCTGCTGGC GGATGAGCCG
CTGTCGATCA AGCAAGCTAA CGGTCAGCTA TGGCAGCCGA AGAACTACGA TCGTGAGTTC
CGCGGCCGTG TCATGCTGGT CGATGCGCTG GCGAACTCGC TGAACGTCCC GACCGTTAAT
CTGGGGATGG CTGTGGGTCT GGATCAGATC ACGGCAACGC TGAAGCGTCT GGGGATCCCG
GAAAACGTGA TTCAACCTGT ACCGGCGATG CTGCTGGGGG CGATCAGTCT GACGCCGATG
GAAGTGGCGC AGGAATACCA GACGATCGCC AGCGGCGGCA ACCGTGCACC GCTTTCCTCG
CTGCGGTCAG TGATTGCGGA AGATGGCACG GTGCTGTACC AGAGCTTCCC GCAGGCTGAA
CGGGCGGTTC CTGCACAGGC GGCCTATCTG ACGCTGTATG GTATGCAGCA GGTTGTTGAA
CGCGGTACGT CACGTTCGCT GGCGGTGAAA TTCCCGAATT ATCATCTGGC GGCGAAAACG
GGGACTACCA ATGACCTGCG TGATAGCTGG TTTGCCGGAA TCGACGGTAA AGAAGTGGCG
ATTAGCTGGG TAGGGCGCGA TAACAACGGC CCGGCCAAGC TGACGGGGGC GAACGGTGCG
CTGACGATTT ATCGTCGCTA TCTGGAAAAC CAGACGCCTC TGCCGCTCAT GTTGACGCCG
CCGGAAGGCA TCACGACCAT GACGGTGGAT GCCAGCGGTA ACTTTATCTG TAACGGCAGC
AGTGCCGGAC GTGTCTTGCC AGTCTGGACG GATAACCCGC AGGCGCTGTG TCAGGCTAGC
CAGCCGCAGC CTTCCCCACA GCAGGGACAG CAAGATGGAG AAGGCGTCGC CGACTGGATC
AAACAAATGT TTGGTCAATA A
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| Protein sequence | MSRDDREPIG RKGKAPKRKP ERKQAIRRRR DDDYDDDDYD DYQDDYDDDD DDDGDDTMTR
KSQRRRRWLG LAIKLFLIFA VAMAIYGVYL DSQIRSRIEG KVWQLPAAVY GRMVNLEPGM
AYSQKEMISL LEGMQYRQVS RITRPGEFSV RGNSIDMLRR PFDFPDGKEG QIQARLTFAN
DRLSQIQNLD NQRNFGFFRL DPKLITMMQS PNGEQRLFVP RSGFPDLLVD TLVATEDRHF
YEHDGISLYS IGRAFLANIT AGRAVQGGST LTQQLVKNLF LTNERSLWRK ANEAYMALIM
DYRYSKDRIL ELYLNEVYLG QSGNDQIRGF PLASLYYFGR PVNELSLDQQ ALLVGMVKGA
SLYNPWRNPE ITLERRNLVL RLLQNQQVID ADLYNMLSAR PLGVQPKGGV ISPQPAFMQL
VRQELQQRLG DKVNDLSGVK IFTTLDPVSQ DAAEKAVEVG VPALRAGRNV SDLEAAMVIV
DRFSGEIRAM VGGSQTQYAG FNRALQARRP VGSLAKPPTY LTALSQPDTY RLNTLLADEP
LSIKQANGQL WQPKNYDREF RGRVMLVDAL ANSLNVPTVN LGMAVGLDQI TATLKRLGIP
ENVIQPVPAM LLGAISLTPM EVAQEYQTIA SGGNRAPLSS LRSVIAEDGT VLYQSFPQAE
RAVPAQAAYL TLYGMQQVVE RGTSRSLAVK FPNYHLAAKT GTTNDLRDSW FAGIDGKEVA
ISWVGRDNNG PAKLTGANGA LTIYRRYLEN QTPLPLMLTP PEGITTMTVD ASGNFICNGS
SAGRVLPVWT DNPQALCQAS QPQPSPQQGQ QDGEGVADWI KQMFGQ
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