| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3109 |
|---|
| Symbol | |
|---|
| ID | 8134070 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012917 |
|---|
| Strand | - |
|---|
| Start bp | 3521097 |
|---|
| End bp | 3521957 |
|---|
| Gene Length | 861 bp |
|---|
| Protein Length | 286 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 644866398 |
|---|
| Product | iron-hydroxamate transporter ATP-binding subunit |
|---|
| Protein accession | YP_003018668 |
|---|
| Protein GI | 253689478 |
|---|
| COG category | [H] Coenzyme transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACGGGCG TTGCGATCGC GGCTTACTCC TGTCCTTCAG TGACACTAAA AACCAAAAAC
GCTATGCAAA ATCAAACTGT ACTGCCTGAT ACCACCTTCA GACTGGACGA CGTCAGTTTT
TCCGTCGCCG GGCGCACGCT ACTACATCCG CTCTCCATCA CATTCCCTGT CGGGAAAGTA
TGCGGTCTGA TTGGGCATAA CGGCTCAGGT AAATCGACCT TGCTGAAAAT ACTGGGCCGT
CACCAGCCTG CCAGCAGCGG AACGGCATTG CTGGGAGAAC AGGTGATTGG AAGCTGGGAC
AGCAAGTTGT TCGCCCGTCA GGTGGCTTAT TTACCGCAGC AGCTTCCTGC CGCCGAAGGG
ATGACCGTGC GTGAACTGGT TGCTGTAGGG CGTTACCCGT GGCATGGCGC ATTAGGCCGT
TTCGGTAGTG CCGATCGGGA AAAGGTTGAA GAAGCCATCA CGCTGGTAGG ACTAAAGCCA
TTCGCGAATC GTCTGGTGGA TAGCCTGTCC GGCGGTGAAC GGCAGCGAGC CTGGCTGGCG
ATGACGGTGG CGCAGGATAG TCGCTGTCTA TTACTGGATG AACCGACCTC CGCACTGGAT
ATTGCCCATC AGGTTGAGGT GCTGGCACTG ATCCAGCGTA TGAGCCGCGA GCGTGGTATC
ACCGTCATTG CGGTGTTGCA TGATATCAAT ATGGCTGCCC GCTACTGCGA TCACTTGGTG
GCGCTGCGGG GCGGCAACAT GATTGCGCAA GGTGAGCCTG TCGCGCTGAT GCAAGGGGAC
GTGCTGGAAA ACATCTACGG TATTCCCATG GGCATTCTGC CTCATCCGGC TGGTGGCGCA
CCGGTCAGCT TCGTTTGTTA A
|
|---|
| Protein sequence | MTGVAIAAYS CPSVTLKTKN AMQNQTVLPD TTFRLDDVSF SVAGRTLLHP LSITFPVGKV
CGLIGHNGSG KSTLLKILGR HQPASSGTAL LGEQVIGSWD SKLFARQVAY LPQQLPAAEG
MTVRELVAVG RYPWHGALGR FGSADREKVE EAITLVGLKP FANRLVDSLS GGERQRAWLA
MTVAQDSRCL LLDEPTSALD IAHQVEVLAL IQRMSRERGI TVIAVLHDIN MAARYCDHLV
ALRGGNMIAQ GEPVALMQGD VLENIYGIPM GILPHPAGGA PVSFVC
|
|---|
| |