| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3082 |
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| Symbol | |
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| ID | 8134037 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 3489969 |
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| End bp | 3490655 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 644866365 |
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| Product | uracil-DNA glycosylase |
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| Protein accession | YP_003018641 |
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| Protein GI | 253689451 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0692] Uracil DNA glycosylase |
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| TIGRFAM ID | [TIGR00628] uracil-DNA glycosylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0349858 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCGACCT CTCTCACCTG GCATGACGTG CTGGCACAAG AAAAGCAGCA GCCTTATTTT
ATCAATACCC TTGAATTCGT AGGGAAAGAG CGTGCAGCGG GTAAGACTAT CTATCCCCCG
CAGAAAGATG TTTTCAACGC ATTCCGCTTT ACCGAACTGC ATCAGGTTAA AGTTGTCATT
TTAGGGCAAG ACCCCTACCA CGGCCCGAAT CAGGCTCACG GCCTGTCATT TTCTGTCCGC
CCTGGTGTAC CCGCACCGCC TTCTCTGGCC AATATTTATA AAGAATTGGC GAGCGATATC
CCTGGATTTG AAATTCCACG ACACGGTTTT CTACAAAGCT GGGCAGAACA AGGGGTTTTA
CTGCTCAATA CGGTATTAAC CGTTGAAGCT GGACAAGCGC ATTCACATGC TAATCTGGGC
TGGGAAACGT TTACCGATCG CGTCATTGCG GCATTGAACG AACAACGGGA AGGTCTGGTC
TTTCTCCTGT GGGGTTCGCA TGCACAGAAA AAAGGCAACA TCATTGACCA ACGGCGCCAC
CATATTCTGA AATCGCCGCA CCCTTCCCCG CTATCTGCAC ACCGCGGTTT TCTGGGCTGC
AAACATTTTT CGCAGGCTAA CCAGCTTCTC GAACAGCAAG GTCTGTCGCC AATAGACTGG
ACGCCAAGGC TCCCGGAAGA AGCTTAA
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| Protein sequence | MATSLTWHDV LAQEKQQPYF INTLEFVGKE RAAGKTIYPP QKDVFNAFRF TELHQVKVVI
LGQDPYHGPN QAHGLSFSVR PGVPAPPSLA NIYKELASDI PGFEIPRHGF LQSWAEQGVL
LLNTVLTVEA GQAHSHANLG WETFTDRVIA ALNEQREGLV FLLWGSHAQK KGNIIDQRRH
HILKSPHPSP LSAHRGFLGC KHFSQANQLL EQQGLSPIDW TPRLPEEA
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