| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3078 |
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| Symbol | |
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| ID | 8134033 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 3485278 |
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| End bp | 3486879 |
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| Gene Length | 1602 bp |
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| Protein Length | 533 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644866361 |
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| Product | L-aspartate oxidase |
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| Protein accession | YP_003018637 |
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| Protein GI | 253689447 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0029] Aspartate oxidase |
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| TIGRFAM ID | [TIGR00551] L-aspartate oxidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0341132 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAACGA CCACTGAATA CGTCTGTGAT GTTTTAATCA TTGGCAGCGG TGCTGCCGGG
CTTTCACTGG CGCTGCGTCT GGCTTCTCAG GCCAACGTGA CGGTATTAAG CAAAGGCCCA
CTCAACGAAG GCGCGACGTT TTATGCTCAG GGCGGCATCG CAGCCGTTTT CGATGAAACT
GACACGATTG ATTCCCATAT CGATGATACG CTGATCGCTG GCGATGGCCT GTGTGAACGG
GAAGCCGTTG AGTTTATCGC CAGCAATGCC AAACACTGCG TGCAATGGCT TATCGAACAA
GGCGTGCTAT TCGATACCGA AACCAGCACC AGCGGTGAAG AACGCTACCA CCTCACGCGC
GAAGGCGGAC ACAGCCATCG TCGAATTCTG CACGCGGCGG ATGCGACCGG AAAAGAAGTA
GAGAACACGC TGGTGCAGAA AGCGCTATCC CATCCGAATA TTCGGATTAT GGAACGCTGC
AACGCCGTCG ATTTAATTAC CTCGAATAAA CTGGGTCTGC CCGGAACACG CCGTATTGTC
GGTGCTTATA TATGGAACCG TGAACAGGAA CGCGTCGAAT CCTGCCGGGC AAAAACGGTG
GTTCTGGCGA CGGGTGGAGC GTCCAAAGTT TATCAATACA CCACCAATCC CGATATTTCC
TCTGGCGATG GCATCGCCAT GGCCTGGCGC GCAGGCTGCC GCGTGGCGAA TCTGGAATTC
AATCAGTTCC ATCCAACCTG TCTGTTCCAT CCGCAGGCGC GAAACTTCCT GCTGACGGAA
GCGCTGCGCG GTGAAGGGGC GTACCTTAAA CGCCCTGACG GCACGCGCTT TATGCCCGAT
TTCGACGCCA GGGGCGAGCT CGCCCCGCGC GATGTGGTCG CCCGCGCGAT TGACCATGAG
ATGAAACGAC TCGGTGCAGA CTGCATGTAT CTGGATATCA GCCACAAGCC CGAAGCGTTC
ATCAAACAAC ACTTCCCTAC CATTGATGAA AAGCTGCAAT CTCTCGGCAT CGATCTAACG
CGTGAAGCAA TACCGATCGT ACCCGCAGCG CACTATACCT GCGGCGGCGT GATGGTCGAC
CAGCACGGGC GTACCGACCT TGACGGCCTG TATGCGATTG GCGAAGTCAG CTACACCGGG
TTGCACGGTG CAAACCGCAT GGCATCCAAC TCATTACTGG AGTGTCTGGT TTACGGCTGG
TCAGCCGCCG AGGATATCTT GCAGCGCTTA CCGCAAATCA AAGCGGTGAA AAAATTACCG
GATTGGGATG AAAGCCAAGT CGACAACTCC GACGAACAGG TGGTGATCCA GCATAACTGG
CATGAACTGC GTCTGTTTAT GTGGGATTAC GTTGGGATCG TGCGGACGAC GAAGCGGTTG
GAGCGGGCAC AGCGCCGCAT CCATCTGCTT CAGCAGGAAA TCAATGAGTA CTATGCCCAC
TTCCGTATTT CCAACAATTT GCTGGAACTA CGTAATCTGG TGCAGGTCGC CGAACTCATT
GTCCGCTGCG CGCTGGAAAG AAAAGAAAGC CGCGGGCTGC ACTATACTCT GGACTATCCA
GAACAGTTCG AAGCGCCGAC GCCAACTATT CTGGTGCCAT AG
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| Protein sequence | MQTTTEYVCD VLIIGSGAAG LSLALRLASQ ANVTVLSKGP LNEGATFYAQ GGIAAVFDET
DTIDSHIDDT LIAGDGLCER EAVEFIASNA KHCVQWLIEQ GVLFDTETST SGEERYHLTR
EGGHSHRRIL HAADATGKEV ENTLVQKALS HPNIRIMERC NAVDLITSNK LGLPGTRRIV
GAYIWNREQE RVESCRAKTV VLATGGASKV YQYTTNPDIS SGDGIAMAWR AGCRVANLEF
NQFHPTCLFH PQARNFLLTE ALRGEGAYLK RPDGTRFMPD FDARGELAPR DVVARAIDHE
MKRLGADCMY LDISHKPEAF IKQHFPTIDE KLQSLGIDLT REAIPIVPAA HYTCGGVMVD
QHGRTDLDGL YAIGEVSYTG LHGANRMASN SLLECLVYGW SAAEDILQRL PQIKAVKKLP
DWDESQVDNS DEQVVIQHNW HELRLFMWDY VGIVRTTKRL ERAQRRIHLL QQEINEYYAH
FRISNNLLEL RNLVQVAELI VRCALERKES RGLHYTLDYP EQFEAPTPTI LVP
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