| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3076 |
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| Symbol | |
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| ID | 8134031 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 3483635 |
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| End bp | 3484282 |
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| Gene Length | 648 bp |
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| Protein Length | 215 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644866359 |
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| Product | anti-RNA polymerase sigma factor SigE |
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| Protein accession | YP_003018635 |
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| Protein GI | 253689445 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3073] Negative regulator of sigma E activity |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000352623 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCAGAAAG AGAAACTTTC CGCTTTAATG GATGGCGAAG CAGTTGATTC CGAACTGCTA
AACGCATTGT CTCGTGATGA TGCGTTGCAG CAAAGTTGGC AAAGTTATCA TCTAATCCGC
GATGCGATGC GTGGTGATGT GAGTGAAAAT GTGATTCACC TGGACATCGC TTCTCGTGTT
GCCGCCGCAA TCGAAAAAGA ACCCGTTCGT CTGGTTCCAC AAGCGCAGCC TGAATCTCAG
CCACAACCTG TTGAGTGGAC GAAGATGCCG TTCTGGCACA AAATCCGTCC GTGGGGCAGT
CAGCTGACAC AAGTCGGCGT CGCCGCCTGC GTATCTTTAG CGGTGATCGT TGGTGTACAA
AATTACCAGC AGGGTGATGC CTCTGAACAC GTTGTCGAAT CCGGTGTGTT TAGTACTTTA
CCTGCGATGG GTACTGCCTC TCCTGTCAGT CTGGGCGTGC CGTCAGAAAA TGTTGCTCCT
CACAGCGGTC AGCAGAAATC TGATATGCAG CGCAACCGCC TTAACGCCAT TTTACAGGAC
TATGAATTAC AGCGCCGACT GCATGCTGAA CACGCTCTGC CACAGGACGA TCAGCAAGCG
GCCATTCAGG TTCCCGGCAC TCAATCATTA GGAACGCAGC CCCGGTAA
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| Protein sequence | MQKEKLSALM DGEAVDSELL NALSRDDALQ QSWQSYHLIR DAMRGDVSEN VIHLDIASRV
AAAIEKEPVR LVPQAQPESQ PQPVEWTKMP FWHKIRPWGS QLTQVGVAAC VSLAVIVGVQ
NYQQGDASEH VVESGVFSTL PAMGTASPVS LGVPSENVAP HSGQQKSDMQ RNRLNAILQD
YELQRRLHAE HALPQDDQQA AIQVPGTQSL GTQPR
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