Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_3032 |
Symbol | |
ID | 8133987 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 3416983 |
End bp | 3417477 |
Gene Length | 495 bp |
Protein Length | 164 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 644866315 |
Product | DNA-binding transcriptional regulator IscR |
Protein accession | YP_003018591 |
Protein GI | 253689401 |
COG category | [K] Transcription |
COG ID | [COG1959] Predicted transcriptional regulator |
TIGRFAM ID | [TIGR00738] rrf2 family protein (putative transcriptional regulator) [TIGR02010] iron-sulfur cluster assembly transcription factor IscR |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.178839 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGACTGA CATCCAAAGG CCGTTACGCC GTTACCGCCA TGCTCGATGT GGCTCTGCAT TCCCAGGAAG GGCCAGTTCC ATTGGCGGAT ATTTCTGAAC GCCAAGGTAT TTCACTGTCT TATCTGGAGC AGCTGTTTTC ACGCTTGCGT AAGAATGGAC TGGTTGCCAG CGTTCGTGGC CCGGGCGGCG GTTACCTGCT GGGTAAAAGC GCGAATGAAA TCGCCGTTGG TATGGTTATT TCTGCCGTCG ATGAATCCGT GGATGCAACA CGCTGCCAGG GTCGTGAAGG CTGTCAGGGT GGCGATCGCT GCCTGACACA CACGCTGTGG CGCGATCTGA GTGACCGTAT TACCGACTTC CTGAATAACA TCACGCTGGA CGAGCTGGTG AATAATAAGG AAGTGCTGGA TGTTGCGGAT CGTCAGGATG CGGACATTCG CCGCACCGCC AATGGACGTA TTCAGGAAAC GATCAACGTT AACCTGCGCG CCTGA
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Protein sequence | MRLTSKGRYA VTAMLDVALH SQEGPVPLAD ISERQGISLS YLEQLFSRLR KNGLVASVRG PGGGYLLGKS ANEIAVGMVI SAVDESVDAT RCQGREGCQG GDRCLTHTLW RDLSDRITDF LNNITLDELV NNKEVLDVAD RQDADIRRTA NGRIQETINV NLRA
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