| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3031 |
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| Symbol | |
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| ID | 8133986 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 3415533 |
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| End bp | 3416747 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644866314 |
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| Product | cysteine desulfurase |
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| Protein accession | YP_003018590 |
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| Protein GI | 253689400 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1104] Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes |
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| TIGRFAM ID | [TIGR02006] cysteine desulfurase IscS
[TIGR03402] cysteine desulfurase NifS |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.563846 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGTTAC CTATCTATCT CGACTACTCA GCCACTACGC CGGTTGACCC GCGCGTCGCT
GAGAAAATGA TGCAGTTTTT GACTTTGGAC GGTACGTTCG GTAACCCGGC TTCCCGTTCC
CACCGTTTTG GCTGGCAGGC GGAAGAGGCG GTAGATATCG CCCGTAACCA AATCGCTGAG
CTGGTTGGCG CTGACCCACG TGAGATTGTC TTCACGTCAG GCGCGACCGA AGCCGATAAC
CTCGCGATTA AAGGCGTTGC CAACTTCTAT CAGAAGAAGG GCAAGCACAT CATCACCAGC
AAGACCGAGC ACAAAGCCGT GCTGGATACC TGTCGTCAGC TTGAGCGCGA AGGTTTCGAG
GTCACCTATC TGGCTCCGCA GCGTAACGGC ATTATCGATC TGGCTGAACT CGAAGCCGCA
ATGCGTGAGG ACACCATTCT GGTTTCCATC ATGCATGTTA ACAATGAAAT CGGTGTTGTG
CAGGATATCG AAACGATCGG CGAGATGTGC CGCAGTCGCG GTATCGTGTT CCACGTCGAC
GCCACGCAGA GCGTAGGCAA GCTGCCTATC GATCTCAACC AGTTAAAAGT GGATCTGATG
TCTTTCTCCG GCCATAAAAT TTATGGACCG AAAGGGATTG GAGCACTGTA TGTTCGTCGT
AAACCCCGTA TTCGTCTTGA AGCACAGATG CACGGCGGCG GCCATGAACG TGGTATGCGT
TCTGGCACCT TGCCTGTGCA CCAGATTGTC GGCATGGGTG AAGCCTACCG CATCGCGAAA
GAAGAGATGA CCGCAGAAAT GGATCGCCTG CGCACGCTGC GCGATCGTCT GTGGAACGGT
ATTAATGATA TTGAAGAAGT CTACCTGAAT GGTGACATTG AGCAGGGCGC GCCTAACATC
CTGAACGTCA GCTTTAACTA CGTTGAAGGT GAATCACTGA TTATGGCGCT CAAGGATCTG
GCGGTATCGT CCGGTTCTGC CTGTACGTCG GCCAGTCTGG AGCCCTCCTA CGTGCTACGT
GCGCTGGGCA TGAATGATGA GCTGGCGCAT AGCTCGATCC GTTTCTCGCT GGGACGTTTT
ACCACCGAAG AAGAGATCGA CTACACCATC GAGCTGGTGC GTAAATCCAT CGGTCGTCTG
CGCGATCTTT CTCCGCTGTG GGAAATGTTC AAGCAGGGCG TGGATATCAG CAGCATCGAA
TGGGCGCATC ATTAA
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| Protein sequence | MKLPIYLDYS ATTPVDPRVA EKMMQFLTLD GTFGNPASRS HRFGWQAEEA VDIARNQIAE
LVGADPREIV FTSGATEADN LAIKGVANFY QKKGKHIITS KTEHKAVLDT CRQLEREGFE
VTYLAPQRNG IIDLAELEAA MREDTILVSI MHVNNEIGVV QDIETIGEMC RSRGIVFHVD
ATQSVGKLPI DLNQLKVDLM SFSGHKIYGP KGIGALYVRR KPRIRLEAQM HGGGHERGMR
SGTLPVHQIV GMGEAYRIAK EEMTAEMDRL RTLRDRLWNG INDIEEVYLN GDIEQGAPNI
LNVSFNYVEG ESLIMALKDL AVSSGSACTS ASLEPSYVLR ALGMNDELAH SSIRFSLGRF
TTEEEIDYTI ELVRKSIGRL RDLSPLWEMF KQGVDISSIE WAHH
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