| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2976 |
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| Symbol | |
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| ID | 8133931 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 3362157 |
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| End bp | 3363518 |
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| Gene Length | 1362 bp |
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| Protein Length | 453 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644866259 |
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| Product | peptidase U32 |
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| Protein accession | YP_003018535 |
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| Protein GI | 253689345 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0826] Collagenase and related proteases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.470288 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTAAAC CGGAACTGCT TTCTCCGGCC GGTACGCTGA AAAATATGCG CTACGCCTTT
GCCTATGGCG CGGACGCGAT TTATGCCGGT CAGCCCCGCT ACAGCCTGCG TGTGCGCAAT
AACGAATTCA ACCATCAGAC GCTGGCGCAA GCCATTAACG AAGCGCATGA ACTGGGCAAG
AAATTCTACG TCGTCGTTAA CATCGCGCCG CACAATGCCA AACTGAAAAC CTTCCTGCGT
GACCTGCAAC CCGTCATCGA AATGGGGCCG GATGCGCTGA TCATGTCCGA TCCGGGTTTG
ATTATGCTGG TGCGGGAAAA CTTCCCACAG ATGGATATTC ACCTTTCCGT TCAGGCTAAC
GCGGTCAACT GGGCGACGGT GAAATTCTGG CAACAGATGG GACTGACGCG CGTCATTCTG
TCCCGCGAGC TGTCGCTGGA AGAGATTGCA GAAATCCGCC AGAACGTCCC GGACATGGAA
CTGGAAATTT TCGTTCACGG CGCACTGTGC ATGGCCTACT CTGGCCGCTG CCTGCTGTCC
GGTTACATCA ACAAACGCGA CCCGAACCAG GGCACCTGCA CTAACGCCTG CCGCTGGGAA
TATAAGGTTC AGGAAGGCAA AGAGGACGAG GTCGGGAATA TCGTTCATCA GCACGAGCCT
ATCGCGGTGA AAAACGTTGA GCCCGCGCTG GGCATCGGCG AACCGACCGA CAAAGTCTTT
ATGCTGGAAG AAAACATGCG TCCCGGCGAG TACATGAGCG CCTTTGAAGA CGAGCATGGC
ACTTACATCA TGAACTCCCG CGATCTGCGT GCGATCCAGC ACGTTGAACG CCTGACGCAA
ATGCAGGTGC ATTCGCTGAA AATCGAAGGC CGCACCAAGT CATTCTATTA CTGTGCCCGT
ACCGCACAGG TTTATCGCCG CGCCATCGAC GATGCTGTCG CGGGTAAACC ATTCGACCCG
ACGCTGCTGG AAACGCTGGA AGGCTTAGCG CACCGTGGCT ACACCGAAGG CTTCCTGCGT
CGCCACGTGC ATGAGGATTA CCAGAACTAC GACTACGGCT ATTCCGTTTC CGATCGTCAG
CAGTTTGTCG GGGAATTCAC CGGTGTACGC CGCGATGGGC TGGCAGAAGT CGAGGTGAAG
AACAAATTTT CCTGCGGCGA CAGCGTGGAG ATGATGACGC CAAACGGCAA TATTCAATTC
ACCATCGAAT CGATGCAGAA TGCCAAAGGT CAGCCAGCCG ATGTAGCACC GGGTAACGGC
CATATCGTCT ATCTGCCCGT GCCGGACGAT GTGTCACTGG ATTATGCGCT ACTGCTGCGC
AATTTGCCGG GCACCACCAC GCGAAATCCT AACGCCGAAT AA
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| Protein sequence | MFKPELLSPA GTLKNMRYAF AYGADAIYAG QPRYSLRVRN NEFNHQTLAQ AINEAHELGK
KFYVVVNIAP HNAKLKTFLR DLQPVIEMGP DALIMSDPGL IMLVRENFPQ MDIHLSVQAN
AVNWATVKFW QQMGLTRVIL SRELSLEEIA EIRQNVPDME LEIFVHGALC MAYSGRCLLS
GYINKRDPNQ GTCTNACRWE YKVQEGKEDE VGNIVHQHEP IAVKNVEPAL GIGEPTDKVF
MLEENMRPGE YMSAFEDEHG TYIMNSRDLR AIQHVERLTQ MQVHSLKIEG RTKSFYYCAR
TAQVYRRAID DAVAGKPFDP TLLETLEGLA HRGYTEGFLR RHVHEDYQNY DYGYSVSDRQ
QFVGEFTGVR RDGLAEVEVK NKFSCGDSVE MMTPNGNIQF TIESMQNAKG QPADVAPGNG
HIVYLPVPDD VSLDYALLLR NLPGTTTRNP NAE
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