| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2958 |
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| Symbol | |
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| ID | 8133913 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 3337435 |
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| End bp | 3338667 |
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| Gene Length | 1233 bp |
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| Protein Length | 410 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644866241 |
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| Product | extracellular solute-binding protein family 1 |
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| Protein accession | YP_003018517 |
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| Protein GI | 253689327 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2182] Maltose-binding periplasmic proteins/domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.347864 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATGA AAACACTGAC CACCGTCATT ATGATTTCAC TGGGTATCAC CGGCGTACTC
AGCAAATCAG CGCTGGCGGC CGACAAAGAG CTTCTGGTAT GGGAAGATAT CAAGAAATCT
GACGGCATCG CCGATGCGAT CAAAGCCTTT GAAAAACAAA ATAATGTCAA AATCAAAGTG
CTGGAAACAC CTTACGCTCA GCAAATTGAG AAACTCCGTC TGGACGGCCC GGCAGGTATC
GGCCCGGATG TGATTGTGAT GCCACACGAT CAGGTTGGCA CCGCCGTGGT TCAAGGATTG
ATTAGCGAAC TGAAACTGGA TCAGACGTTC CTGTCGAGTT TCACCAAACC CGCACTGGAA
GCGCAAACCT ATAACGGTAA GCTGTATGGC GTGCCAAAAG CCGTTGAAAC CACCGTGCTG
GTGTACAACA AAGACCTGAT GCCACAGCCG CCGGAAAAAT TCGACGATCT GTTTACCTTC
TCCAAGCAGC AACGAGCCGA AGGTCGCTAC GGTCTGCTGG CAAAATTTGA CGAGATTTAT
TACGCCTATG GCGTCATCGC AGGGATGGGT GGCTACATTT TCGGCCAGAA CAGCAACGGT
TCACCGAATG TCAAAGACAT CGGTCTGGAT AAACAAGCCA CCATCAATGC CGTGAACTAC
ATCAAGAAAT TCTACGCTGA TGGCCTGTTC CCACCGGGCA TCGTCGGCGA AACCGGCGCT
AACGCCATCG ACTCCCTGTT TACCGAGAAA AAAGCCGCAG CGGTGATTAC CGGCCCGTGG
GCATTCCAAC CCTACAAGAA CGCTGGCGTA AATTACGGCG TGGCGCCACT GCCGCTGCTG
CCAAACGGCG AGCATCCACG TTCACTGCTG GGTGTGAAAG GCTACAGCAT TTCCACCTAC
TCCAAAAACA AAGAGCTGGC ACAAAAATTC ATTGAGTTCA TCAATCAGCC GGAATACGCC
AAAGTTCGCT TCCAGTTGAC CGGTGAAATC CCACCGATCG CCGCACTGGT TGACGATCCG
CTGATTAAAG ATGATGAAAA ATCCCGTGCT GTTGCAATCC AGTCTGGTTA TGCCGTCCCT
ATGCCAAGCG TACCGGAAAT GCAGGAAGTC TGGACGCCAG CCAACAGCGC GTTGCAACTG
AGCGTGACGG GCAAACAGGA CACCAAAGCG GCGCTGGAAT CCGCCGTGAA AGTCATAAAA
ATGCAGATCG AAGCCAACCA CAGTAACCAG TAA
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| Protein sequence | MKMKTLTTVI MISLGITGVL SKSALAADKE LLVWEDIKKS DGIADAIKAF EKQNNVKIKV
LETPYAQQIE KLRLDGPAGI GPDVIVMPHD QVGTAVVQGL ISELKLDQTF LSSFTKPALE
AQTYNGKLYG VPKAVETTVL VYNKDLMPQP PEKFDDLFTF SKQQRAEGRY GLLAKFDEIY
YAYGVIAGMG GYIFGQNSNG SPNVKDIGLD KQATINAVNY IKKFYADGLF PPGIVGETGA
NAIDSLFTEK KAAAVITGPW AFQPYKNAGV NYGVAPLPLL PNGEHPRSLL GVKGYSISTY
SKNKELAQKF IEFINQPEYA KVRFQLTGEI PPIAALVDDP LIKDDEKSRA VAIQSGYAVP
MPSVPEMQEV WTPANSALQL SVTGKQDTKA ALESAVKVIK MQIEANHSNQ
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