Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_2938 |
Symbol | |
ID | 8133893 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 3312316 |
End bp | 3313386 |
Gene Length | 1071 bp |
Protein Length | 356 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 644866221 |
Product | phosphoribosylaminoimidazole carboxylase ATPase subunit |
Protein accession | YP_003018497 |
Protein GI | 253689307 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0026] Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) |
TIGRFAM ID | [TIGR01161] phosphoribosylaminoimidazole carboxylase, PurK protein |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.42936 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACCGG TCTGCGTATT AGGTAATGGT CAGTTGGGCA GAATGCTGCG TCAGGCTGGC GAACCATTAG GTATTGCCGT TTATCCGGTG GGACTGGATG CCGAGCCGGA ATCGGTGCCG TTTCATAACA GTGTGATTAC CGCCGAGATC GAGCGCTGGC CGGAGACCGC CCTCACCCGT GAATTGGCCG AACACACCGC GTTTGCGAAC CGCGATATTT TCCCGCGTCT GGCCGATCGC CTGACGCAAA AACAGCTGCT GGATTCGCTG AATCTGGCGA CCGCGCCTTG GCAATTACTG GCCAGCGCCG ATGAATGGCC GCACGTTTTT TCCTCATTAG GTGAACTGGC GATCGTTAAA CGTCGCGTTG GTGGTTACGA CGGTCGCGGA CAGTGGCGCT TACGCGATGG GGAACAGCAG ACGTTGCCTG CTGACTGCTA CGGCGAATGC ATCGTTGAAC AAGGCATTAA TTTTTCCGGT GAAGTCTCAC TGGTCGGTGC CCGCAATACG CACGGCAAAT GCGTGTTCTA TCCACTCACC CATAACCTGC ATCAGGATGG CATTCTGCGC ACCAGCGTGG CCTTCCCTCA GCCCAACCCG CAATTGCAAC AACAGGCAGA GCAGATGCTA TCCGCGATTA TGAACGCGCT GGGTTATGTC GGTGTGATGG CGATGGAATG TTTTATTGTC GGCGATCGTC TGCTCATTAA CGAGCTGGCT CCCCGCGTAC ACAATAGCGG CCACTGGACG CAAAATGGCG CATCGATCAG CCAGTTTGAA TTGCACCTGC GCGCCATTCT GGATCTGCCG CTGCCGGTAC CGGTCGTTGA AACGCCTTCG GTGATGGTCA ACCTGATTGG CACCGACGTA AATATCGATT GGCTGGCGCT GCCGCTGGTA CATCTGCACT GGTATGAGAA AGAGGTTCGT CCCGGCCGCA AAGTTGGACA CCTCAATTTA TCGTCATCGG ATGCCGCACA GCTGCAACAT ACGCTGCAAT CGCTAGCACC TCTATTACCA GAGGAATACC ACAGCGGTCT GGCGTGGGCA GAAGAAAAAC TGACTGCCTG A
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Protein sequence | MKPVCVLGNG QLGRMLRQAG EPLGIAVYPV GLDAEPESVP FHNSVITAEI ERWPETALTR ELAEHTAFAN RDIFPRLADR LTQKQLLDSL NLATAPWQLL ASADEWPHVF SSLGELAIVK RRVGGYDGRG QWRLRDGEQQ TLPADCYGEC IVEQGINFSG EVSLVGARNT HGKCVFYPLT HNLHQDGILR TSVAFPQPNP QLQQQAEQML SAIMNALGYV GVMAMECFIV GDRLLINELA PRVHNSGHWT QNGASISQFE LHLRAILDLP LPVPVVETPS VMVNLIGTDV NIDWLALPLV HLHWYEKEVR PGRKVGHLNL SSSDAAQLQH TLQSLAPLLP EEYHSGLAWA EEKLTA
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