Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_2935 |
Symbol | |
ID | 8133890 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 3310404 |
End bp | 3310898 |
Gene Length | 495 bp |
Protein Length | 164 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 644866218 |
Product | peptidyl-prolyl cis-trans isomerase B (rotamase B) |
Protein accession | YP_003018494 |
Protein GI | 253689304 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0366862 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTACGC TTCATACCAA CCACGGCGAT ATCGTTATTA ATACGTTTGC AGACAAGGCG CCGGTTACCG TAGAAAACTT CCTGAACTAC TGCCGCAGCG GTTTTTATGA CAACACGATT TTCCACCGTG TGATTAATGG TTTCATGATT CAGGGCGGCG GCTTCGCTCC CGGTATGGAT CAGAAAGAAA CCAACGCGAC AATCAAAAAT GAAGCCAACA ACGGCCTGAA AAACACGCGT GGCACGCTGG CAATGGCGCG TACCAACGAT CCGCACTCTG CAACGGCTCA GTTCTTTATC AACGTTGTCG ATAACGACTT CCTGAACTTC CGTTCAGAGC GTGCAGATGG CTGGGGCTAC TGCGTTTTCG CTGAAGTCGC CGAAGGTATG GACGTCGTTG ATAAAATCAA AGGCGTAGCT ACTGGCCGCA GCGGCATGCA TCAGGACGTA CCGAAAGAAG ACGTGGTAAT TACCCACGTA ACGGTCAGCG AATAA
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Protein sequence | MITLHTNHGD IVINTFADKA PVTVENFLNY CRSGFYDNTI FHRVINGFMI QGGGFAPGMD QKETNATIKN EANNGLKNTR GTLAMARTND PHSATAQFFI NVVDNDFLNF RSERADGWGY CVFAEVAEGM DVVDKIKGVA TGRSGMHQDV PKEDVVITHV TVSE
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