Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_2853 |
Symbol | |
ID | 8133807 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 3227069 |
End bp | 3228055 |
Gene Length | 987 bp |
Protein Length | 328 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 644866141 |
Product | General secretion pathway protein K |
Protein accession | YP_003018418 |
Protein GI | 253689228 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3156] Type II secretory pathway, component PulK |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGGCCGC GTCAGCGCGG TGCGGCGCTG CTGGTGGTGC TCCTTATTCT GGCATTAATG GTGACGATTG CCGCGGTGAT TACGGAACGC ACAGGTAAAG CGTTTTTGCG CACCGAGAGC CATTTGAGCC GTCAGCAGGC GAAGTGGTAC GCCTTGGGGG CAGAAACGCT AAGCGGGCAG ATATTGCTGC GCGATGCGCG GAATATGCCG GGACGTACGT TTGCCGGACA GAACTGGTCA CAACCGGGGC ATCGTTTCCC GGTGGACGGC GGGGAAATCA TCGGCCAGAT TAGCGATGCG CGTACCTGCT TTAATCTGAA TGCGATCAAT CAAGGCGTGG ATAACGACAG CACGCTGGTG AAGACGCCTT ATCCGGCGCA GGTTTTCCGT TTGCTATTGA AAAATCTAGG CGAAGATGCA GATCGTGCAG AAAAGATCAC TGCGGCGGTG CGTGACTGGA TTGATGCGGA TAACTATCCG TCGGCGAACG GTGCAGAGGA TGATGTCTAC GCCACACTGC CAGTGCCTTA TCGTACGGCC AATCAGAGAA TGAGTGAAAT CAGCGAATTG CGCGCAGTCT ATGGCGTGGA CAGCGATCTT TATCGTCGTT TGTTACCTTA TGTTTGCGCG CTGCCGGTGG ATACGATGTC AATTAATATC AACACGTTAA CCGAGTTTGA TGCCCCTCTG TTATCCGCCA TATTCTTGAA TGAAATGACG ATGTCGCAGG CGAAGGCGCT GGTGCAGCAG CGACCTCGTA CGGGATGGGC AAGCCTTGAG GTTCTGCAAC AAACCGGGTT ATTGCCTCCG AATAGTAAAA ATACCGCGCA GCGAGTGCTG TCAGTAAAAA GTGAATGGTT CTTTGTCAAA CTTCAGGTGC GTGTCGGCGA CAGTGATTTT CATCAGCGCA GCCTGCTTCA TCTGAGTGGA CAAAAGGTAC AGGTCGTGCA GCGGCAATAT GGAGGATATA GGACGGTGAA TCCATGA
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Protein sequence | MRPRQRGAAL LVVLLILALM VTIAAVITER TGKAFLRTES HLSRQQAKWY ALGAETLSGQ ILLRDARNMP GRTFAGQNWS QPGHRFPVDG GEIIGQISDA RTCFNLNAIN QGVDNDSTLV KTPYPAQVFR LLLKNLGEDA DRAEKITAAV RDWIDADNYP SANGAEDDVY ATLPVPYRTA NQRMSEISEL RAVYGVDSDL YRRLLPYVCA LPVDTMSINI NTLTEFDAPL LSAIFLNEMT MSQAKALVQQ RPRTGWASLE VLQQTGLLPP NSKNTAQRVL SVKSEWFFVK LQVRVGDSDF HQRSLLHLSG QKVQVVQRQY GGYRTVNP
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