| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2849 |
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| Symbol | |
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| ID | 8133803 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 3223615 |
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| End bp | 3224460 |
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| Gene Length | 846 bp |
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| Protein Length | 281 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644866137 |
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| Product | Prepilin peptidase |
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| Protein accession | YP_003018414 |
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| Protein GI | 253689224 |
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| COG category | [N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1989] Type II secretory pathway, prepilin signal peptidase PulO and related peptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.993621 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGACGATT TAAGGGAATT CGCACTGGTA TTTCCGGCAT GGTGGTATGG TGCGCTGGGC
GTATTGGGCT TGATTGTTGG CAGTTTTCTG AACGTCGTGA TTTACCGCCT GCCGATTATG
TTAGAACGCC GCTGGCGGCA GGACATCGAA CTGCAAACGG GTGTGACCGA TGTCGAGCAT
GTGACGAGTT ACAACCTGTG TTGGCCGCCT TCGTCTTGCC CGCACTGTCA GCAGGCGATT
GCGGTGAAAG ATAACATCCC GTTATTCAGC TGGCTGTGGC TGCGCGGCCG CTCCCGCTGC
TGTCATCAGC CAGTGTCTGT GCAGTATCCG CTGGTGGAAG TCATTACGAT GCTGGCTTTT
CTGGTCGCAG GGTTACTGTG GTTGCCCGGC ATGGCGTTAT GCGGGGCGCT GATTCTGCTG
TCCTTTCTGG TGGTTTTGAC CGTCATTGAT ATAAAAACGT TACTGCTGCC AGATGTGCTT
ACGCTTTCGC TCTTGTGGAT GGGACTGCTG TTTAATCTGT CGGAGACCTT TGTCCCATTA
CGCGATGCCG TAGTAGGCGC GATGGCGGGC TATTTGTCCC TGTGGCTACT TTATTGGGTA
TTTAAATATG CCACAGGCAA AGAAGCGCTA GGGTATGGTG ATTTTAAGTT ACTCGCCGCG
CTGGGTGCCT GGCTGGGCTG GCAGGCATTG CCGAATCTGG TCTTGGTGGC GGCGCTGAGC
GGGCTGGTCG TTACTCTCAT CTGGCGCGGG GTGCGTAAAG AAGATACGGT TAAACCGTTG
GCCTTTGGCC CTTGGCTGGC GATTGGCGGC GTGTTCGGTG TGATAATGAA CGGACTCTAT
CTGTAG
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| Protein sequence | MDDLREFALV FPAWWYGALG VLGLIVGSFL NVVIYRLPIM LERRWRQDIE LQTGVTDVEH
VTSYNLCWPP SSCPHCQQAI AVKDNIPLFS WLWLRGRSRC CHQPVSVQYP LVEVITMLAF
LVAGLLWLPG MALCGALILL SFLVVLTVID IKTLLLPDVL TLSLLWMGLL FNLSETFVPL
RDAVVGAMAG YLSLWLLYWV FKYATGKEAL GYGDFKLLAA LGAWLGWQAL PNLVLVAALS
GLVVTLIWRG VRKEDTVKPL AFGPWLAIGG VFGVIMNGLY L
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