Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_2842 |
Symbol | |
ID | 8133796 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 3215937 |
End bp | 3216509 |
Gene Length | 573 bp |
Protein Length | 190 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 644866130 |
Product | hypothetical protein |
Protein accession | YP_003018407 |
Protein GI | 253689217 |
COG category | [R] General function prediction only |
COG ID | [COG3545] Predicted esterase of the alpha/beta hydrolase fold |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCAGACAA CAGAAATCGA TCGGCGGCTG ACGGAAGTGA GCCAGCAGCT AACGATGGTG CTGGTGCCAG GATTGCGAGA CAGCGATGAC GAGCACTGGC AGAGCCATTG GGAACGGCGT TTTCCTCACT GGCACCGTAT ACGCCAGCGG GAATGGTATC AGGCCGATCT GGACCGCTGG GTGTTAGCGA TCCGTCGTGA ACTTAGCGTC TGTACACAGC CCGTGATACT GATCGGCCAT AGCTTTGGCG CACTGGCTTC CTGCCATGTT GTGCAACAAG GCCAGGAAGG GATTGCCGGT GTGATGCTGG TGGCGCCTGC CGAGCCCATG CGCTTTGAGA TTGATGAGCG CATTCAGACT ACACCGCTGC CGGTTCCGGC GTTGACCGTT GCCAGCCATA ACGATCCTTT AATGAGTTTT ACTCGCGCCC AATATTGGGC GCAGGCGTGG GGCAGTGAAC TGGTTGATGT CGGTGAGGCA GGGCACATTA ATGCAGAAGC GGGGTTTGGT CCATGGGAAT ACGGCCTGAC AAGATTAGCT GAGTTTTCAG AGGCACTCAT TGCTAGTCGT TAA
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Protein sequence | MQTTEIDRRL TEVSQQLTMV LVPGLRDSDD EHWQSHWERR FPHWHRIRQR EWYQADLDRW VLAIRRELSV CTQPVILIGH SFGALASCHV VQQGQEGIAG VMLVAPAEPM RFEIDERIQT TPLPVPALTV ASHNDPLMSF TRAQYWAQAW GSELVDVGEA GHINAEAGFG PWEYGLTRLA EFSEALIASR
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