| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2800 |
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| Symbol | truA |
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| ID | 8133753 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 3172005 |
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| End bp | 3172856 |
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| Gene Length | 852 bp |
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| Protein Length | 283 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644866088 |
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| Product | tRNA pseudouridine synthase A |
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| Protein accession | YP_003018366 |
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| Protein GI | 253689176 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0101] Pseudouridylate synthase |
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| TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.420943 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGGAAA CCACTCAGGC GGAGGCGATT CAGGCCGACG CCGCTGCGGA AAACGAACGC
GCCCCGCTGA AAATCGCGTT GGGCATTGAG TATGACGGTA GCCAGTATTA TGGCTGGCAG
CGCCAGAGTG ATGTCGCTAG CGTGCAGGCT TGTCTTGAAA AGGCGCTGAG CAAAGTCGCG
GATGAACCGA TAGAAGTGTT TTGTGCCGGC CGAACCGATG CTGGGGTTCA CGGTACCGGA
CAGGTTGTGC ACTTCACCAC GCAGGCGATC AGAAAAGATG CCGCCTGGAC GATGGGGGTG
AATGCGAATT TACCGCCAGA TATCGCTGTG CGCTGGGTGA AAACGGTGGA GGAGGATTTC
CATGCGCGCT TCAGCGCGAC GGCACGTCGC TATCGCTATG TCATCTATAA TCACCGCTAT
CGCCCAGCGG TGCTCTCACA TGGCATGACG CACTTTTATC ATCCGTTGGA TGTGGATCGG
ATGGAGCGTG CCGGGCAATG TCTGTTGGGG GAGAATGATT TCACCTCTTT TCGGGCGGTG
CAATGCCAGT CGCGCACGCC GTGGCGCTAT GTAAATCATT TAAAGGTTAC ACGTCACGGT
GACTATATCG TGGTAGATAT TAAGGCCAAT GCGTTCGTTC ATCATATGGT GCGCAACATT
GTTGGTAGCC TGATGGAAGT CGGTTGTGGC AATCGCCCTG AGTCGTGGAT TGCAGAGCTG
CTGGCGGCCA AAGATCGTAC GTTGGCGGCA GCGACGGCCA GAGCCGAAGG GTTGTATTTA
GTGGCGGTGG ATTACCCGGC GCGTTTTGCC TTGCCACAGC CCACGATGGG CCCACTCTTT
TTGGCGGACT AG
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| Protein sequence | MSETTQAEAI QADAAAENER APLKIALGIE YDGSQYYGWQ RQSDVASVQA CLEKALSKVA
DEPIEVFCAG RTDAGVHGTG QVVHFTTQAI RKDAAWTMGV NANLPPDIAV RWVKTVEEDF
HARFSATARR YRYVIYNHRY RPAVLSHGMT HFYHPLDVDR MERAGQCLLG ENDFTSFRAV
QCQSRTPWRY VNHLKVTRHG DYIVVDIKAN AFVHHMVRNI VGSLMEVGCG NRPESWIAEL
LAAKDRTLAA ATARAEGLYL VAVDYPARFA LPQPTMGPLF LAD
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