Gene PC1_2799 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_2799 
Symbol 
ID8133752 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand- 
Start bp3171146 
End bp3171808 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content49% 
IMG OID644866087 
Producthypothetical protein 
Protein accessionYP_003018365 
Protein GI253689175 
COG category[S] Function unknown 
COG ID[COG0586] Uncharacterized membrane-associated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.606088 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAATTTA TACAGTTTAT TATTGATTTT ATTCTGCACA TTGACGTTCA TCTGGCGGAA 
CTGGTGGCGC AATATGGTGT CTGGGTTTAT GCCATTTTGT TCCTGATTTT GTTCTGTGAA 
ACCGGGCTGG TAGTGACGCC GTTTCTGCCG GGCGATTCAC TGCTGTTTGT TGCAGGGGCG 
CTGGCGGCGT TACCGTCGAA CGATCTGAAT GTGCATACAA TGGTGTTCCT GATGATTGTT 
GCTGCAATCA CGGGTGATGC AGTGAACTAC ACTATTGGCC GGCTGTTCGG TGAAAAGTTG 
TTTAGCAATC CGAATTCGAA GATTTTTCGC CGCAGCTATC TGGATAAAAC GCACGCGTTT 
TACGAGCGTC ACGGCGGTAA GACGATAATT CTGGCGCGCT TTGTCCCGAT TGTGAGAACA 
TTTGCGCCGT TTGTCGCCGG GATGGGGCAC ATGAGCTATC GGCATTTTGC GGCCTATAAT 
GTCATTGGTG CGCTGTTGTG GGTGCTGTCG TTCACCTATG CGGGCTACCT GTTTGGCGAT 
TTGCCGGTCG TGCAGGAAAA TCTGAAATTA CTGATTGTCG CGATTATTTT TCTCTCTATC 
CTGCCGGGCG TTATTGAGAT TGTCCGCCAT CGTAGAGCAG CCGCGCGCGG CAATGTGAAA 
TAA
 
Protein sequence
MEFIQFIIDF ILHIDVHLAE LVAQYGVWVY AILFLILFCE TGLVVTPFLP GDSLLFVAGA 
LAALPSNDLN VHTMVFLMIV AAITGDAVNY TIGRLFGEKL FSNPNSKIFR RSYLDKTHAF 
YERHGGKTII LARFVPIVRT FAPFVAGMGH MSYRHFAAYN VIGALLWVLS FTYAGYLFGD 
LPVVQENLKL LIVAIIFLSI LPGVIEIVRH RRAAARGNVK