Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_2718 |
Symbol | |
ID | 8133671 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 3078946 |
End bp | 3080493 |
Gene Length | 1548 bp |
Protein Length | 515 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 644866006 |
Product | carbohydrate kinase FGGY |
Protein accession | YP_003018284 |
Protein GI | 253689094 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1070] Sugar (pentulose and hexulose) kinases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATTACT ACATTGGCAT TGATATCGGG ACCTCAAAGG TCAAATCGGT GTTATTCGAT GCCGATTTCA ACGAACTTCA GATTGAGTCA GCCAATACCG TTACTTACTC TCCGCAGCCC GGCTACGCCG AGCAAAATAT GCACCATGTA TGGGACGGCG TACTTTCTAC CCTGAAAACA CTGGCCGCTT CGCCGCTGCT TCATCACGGG CGTGTGCGAG CCATCGGGCT GACTGGCCAA GGCGAAGGTG TCTGGCTGAG CGATCGCCAC GGGCAACCTA TCCGGCAAGC CATCCTCTGG AGCGATACTC GGACGGCGGA ACAGGTTCAT CAGCTTAAAC AGCGACCGAA TCTGGAAGCG ACGCTCTTTC CCGAAACCGG TTCTCCCCTG CTCCCTTGTA ACAGCGCGCA GCAGTTGCGC TGGCTGGCAC AACATCAGCC AGATGTGCTG AACGATGCCG ATTACTTCTT TTTTGCCAAA GACTGGGTTC GCTTTCGACT GACGGGACAG GCTAATCTGG AACTGACGGA TGCTGGGACG TCGCTGCTGG ATCTGCATAG CGAAACGCTG TCAAAAACCG TGCTGGATAA GCTGGACTTA CACGCCATCA GACCACTTTT CCCACCGCTG CTTTATCCCG ATGACATCGC CGGCACGCTC AGCGACGCCA TCGCCGCACA AACGGGTCTG CCTGCGGGAA TTCCCGTCTG CGCAGGCGCA CTGGATGTGT CCGCCGCAGC GCTGGGCATC GGCGCTATTC ACGACGGCGA CATTTTCACC ATTCTCGGCA CCACCTGCTG CACTGGCATT GTCTGCCGGG GTTTAACGCA GGTGAGCCTG CAAACCCGGT TTGTCGCGCA CGCCTGGCCA GGCCACTATC TCAACCTGTT CGCGATGCAG TCTGGCACGC CGAATATTGA CTGGGCGCTG AGCACGCTGA CCAATGATGC CGATTTTCAG ACCATCAACG CACGCATTGC CCGCGTGCCG CCCGGCAGCG GTGGCGTTTT CTATCAACCT TACCTTAATG GCGAGCGCGC GCCGTTTTAC AGTACATCAG CACGAGCGGG ATTTTTTGGC ATCGAGCAGT CCACCACTAA CGCGCATCTA CTGCGAGCGG TCTTTGAGGG ACTCGCCTAT GCGATTACCG ATGCGCTCAG CGGCTACCCT GCTCACGGCG ATCTCTACAT CGCCGGTGGC GGCGCCGCTT CAGCAATTTG GCTGCAAATC ATCGCGGACT GCACCGGACG GCGGGTGATC GCCAGTTCGG TCAAAGAGCT GAGCGCATGC GGTGCCGCGC GCCTTGCCGC CCTGTCCATC GGAGAAAGTG CCAACATGGT TCCTTCCGCC AATGCGCAGG CCTCAACGTT TCTCCCTGAT GCCGACGCCC ATCGGCAATA TCAGACACTG TTTCCGATTT TTCGCCAACT GCGCGACCAG CTACAGCCGC TCTGGCAGGC ACGGGCTCGG GCGCTTAATG CACTCGACAA TCACAACGCG GCGCGTTCGT ACACGGCTCC TAGCTCACAG GAAAGTCTTG CCTCATGA
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Protein sequence | MDYYIGIDIG TSKVKSVLFD ADFNELQIES ANTVTYSPQP GYAEQNMHHV WDGVLSTLKT LAASPLLHHG RVRAIGLTGQ GEGVWLSDRH GQPIRQAILW SDTRTAEQVH QLKQRPNLEA TLFPETGSPL LPCNSAQQLR WLAQHQPDVL NDADYFFFAK DWVRFRLTGQ ANLELTDAGT SLLDLHSETL SKTVLDKLDL HAIRPLFPPL LYPDDIAGTL SDAIAAQTGL PAGIPVCAGA LDVSAAALGI GAIHDGDIFT ILGTTCCTGI VCRGLTQVSL QTRFVAHAWP GHYLNLFAMQ SGTPNIDWAL STLTNDADFQ TINARIARVP PGSGGVFYQP YLNGERAPFY STSARAGFFG IEQSTTNAHL LRAVFEGLAY AITDALSGYP AHGDLYIAGG GAASAIWLQI IADCTGRRVI ASSVKELSAC GAARLAALSI GESANMVPSA NAQASTFLPD ADAHRQYQTL FPIFRQLRDQ LQPLWQARAR ALNALDNHNA ARSYTAPSSQ ESLAS
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