Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_2656 |
Symbol | |
ID | 8133604 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 3011672 |
End bp | 3013654 |
Gene Length | 1983 bp |
Protein Length | 660 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 644865939 |
Product | tail fiber repeat 2 protein |
Protein accession | YP_003018222 |
Protein GI | 253689032 |
COG category | [R] General function prediction only |
COG ID | [COG5301] Phage-related tail fibre protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTACGA AATACTTTGT CTTACTAACG AATATTGGTG CAGCCAAGCT GGCAAACGCC ACCGTGCTAG GTTCACATCT TGATATCACG CATATGGCTG TGGGCGATGG CGGCGGCACG CTTCCAACAC CGAACCCAGC ACAAACCGCC CTGATTAATG AAAAGCGACG GGCGGGCATC AATACACTGA GCGTTGATCC AGTAAATACC AATCAGATTA TTGCGGAACA AGTCATTCCA GAAAATGAAG GCGGATTCTG GATACGTGAA ATCGGCCTGT TTGACGCTGA CGGCGATCTG GTCGCAATAG GGAACTGCGC CGAGACGTAC AAACCATTAC TACAAGAGGG AAGCGGTCGT ATTCAGACCG TGCGTATGAT CCTGATTGTC AGCAGCACTG ACGCGGTGAC GTTGAAAATC GATCCGGCAG TCGTGCTAGC AACGCGGGGC TATGTTGATG ATGCTATCAA TGCACATGAA AAAAGCCGCA AACACCCTGA CGGCACGTTA AACGCAAAGG GATTCGTGCA ACTTAGCAAC GCGACGAACA GCGACAGTGA GCTACTGGCC GCAACCCCTA AAGCGGTGAA AGCGGCCGTT ACTGCTGCCA ACAATGCCGC CACCGCAGCA GCTAACGCGA ATACCAACGC CAATGGCCGC GTGCCGTCTG CACGGAAAGT GAACGGTAAA GAACTGACAG CAGATATCGC CCTTATTGCT GCCGATGTGG GGGCGTATAC CAAAGCAGAA ACTGATACCC GTGTTGCCAC GGCAACCACT GCTGCCAACA ATGCCGCCAC CGCAGCGGCT AACGCGAATA TCAACGCCAA TGGCCGCGTG CCGTCTGCAC GGAAGGTTAA CGGTAAAGCG CTAACGGCTG ATATCGCCCT TACTGCCACC GATGTAGGGG CATATACCAA AGCAGAAACT GATACCCGCG TTGCCACGGC AACCACCGCT GCCAACAATG CCGCCACCGC AGCGGCTAAC GCCAACACGA ACGCTAATGG CCGCGTGCCG TCCGGGCGTA CCGTCAACGG TAAAGCGCTG TCGGCAGATA TCGCGCTGGG TGCCGGGGAT GTGGGGGCAT ACACCAAAGC GGAAACCGAC ACCCGCGTCA CCGCAGCAAC CACCGCCGCG AATAATGCCG CTACGGCAGC GACCAACGCG AATACCAACG CTAATGGCCG CGTGCCGTCA GGGCGTACCG TTAACGGCAA AGCGCTATCG GCAGATATCG TGCTCACTGC TGGTGACGTT GGTGCGCTGA CTGCGGGTGG CACTGCGGCT GCGGCTACTA AGCTGGCTAC AGCCCGCAAA ATCAACGGCG TGGCATTTGA CGGTTCGGCA GATATTATCG TTGATTCTGA CTGGTCACAG ATTAAAAACG TTCCCGCGGC ATCATATGAC GTCGCGGGTG TGGTGGTGTT GAGCTCGTCA ATTAACAGTA ATAGCAGAAC TATTGCTGCG ACAGCGCAGC AGCTTTTTAC GGCTCACTCT ATTGCAACTA ACGCGCTGGC AAAAGCGACT GCGGCGTTGC CAGCGGATGG AACTGCGGCG GCGGCGACTA AATTGGCGAC CCCCAGAAAA ATTAATGGCG TAGCATTTGA TGGTACATCG GACATTGATC TAAATGGGTC ACGAGTATGG ATTTCGGGTG AGTACACGCC TGCAACCAGC ACGCCAATCG TAGTGTCTCA CGGATTGGTC GGTATTAATC CCCTGCACTG TCGTTGCGAT GTGTTGGTTA AATGTGTCGT CGCAGAAGGC GAATACCGCG CTGGTGAGTT TGCGATTAAT CCCATGACAC TTTTTATGCA GCAAGGTGTC GCCCATCCCT ATTCGTTGTT GCCAGCATTA AATGCAGGCA CTGTGCAGTT GAACATCATG CACTATCTGG CTGCGTCATT TAAAACCAGC ACGATAGGCA ATCAGCAACT GAATATGGCT AATTGGCGTT GTATTCTTCG TATTTTTTAT TAG
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Protein sequence | MSTKYFVLLT NIGAAKLANA TVLGSHLDIT HMAVGDGGGT LPTPNPAQTA LINEKRRAGI NTLSVDPVNT NQIIAEQVIP ENEGGFWIRE IGLFDADGDL VAIGNCAETY KPLLQEGSGR IQTVRMILIV SSTDAVTLKI DPAVVLATRG YVDDAINAHE KSRKHPDGTL NAKGFVQLSN ATNSDSELLA ATPKAVKAAV TAANNAATAA ANANTNANGR VPSARKVNGK ELTADIALIA ADVGAYTKAE TDTRVATATT AANNAATAAA NANINANGRV PSARKVNGKA LTADIALTAT DVGAYTKAET DTRVATATTA ANNAATAAAN ANTNANGRVP SGRTVNGKAL SADIALGAGD VGAYTKAETD TRVTAATTAA NNAATAATNA NTNANGRVPS GRTVNGKALS ADIVLTAGDV GALTAGGTAA AATKLATARK INGVAFDGSA DIIVDSDWSQ IKNVPAASYD VAGVVVLSSS INSNSRTIAA TAQQLFTAHS IATNALAKAT AALPADGTAA AATKLATPRK INGVAFDGTS DIDLNGSRVW ISGEYTPATS TPIVVSHGLV GINPLHCRCD VLVKCVVAEG EYRAGEFAIN PMTLFMQQGV AHPYSLLPAL NAGTVQLNIM HYLAASFKTS TIGNQQLNMA NWRCILRIFY
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