Gene PC1_2656 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_2656 
Symbol 
ID8133604 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp3011672 
End bp3013654 
Gene Length1983 bp 
Protein Length660 aa 
Translation table11 
GC content54% 
IMG OID644865939 
Producttail fiber repeat 2 protein 
Protein accessionYP_003018222 
Protein GI253689032 
COG category[R] General function prediction only 
COG ID[COG5301] Phage-related tail fibre protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTACGA AATACTTTGT CTTACTAACG AATATTGGTG CAGCCAAGCT GGCAAACGCC 
ACCGTGCTAG GTTCACATCT TGATATCACG CATATGGCTG TGGGCGATGG CGGCGGCACG
CTTCCAACAC CGAACCCAGC ACAAACCGCC CTGATTAATG AAAAGCGACG GGCGGGCATC
AATACACTGA GCGTTGATCC AGTAAATACC AATCAGATTA TTGCGGAACA AGTCATTCCA
GAAAATGAAG GCGGATTCTG GATACGTGAA ATCGGCCTGT TTGACGCTGA CGGCGATCTG
GTCGCAATAG GGAACTGCGC CGAGACGTAC AAACCATTAC TACAAGAGGG AAGCGGTCGT
ATTCAGACCG TGCGTATGAT CCTGATTGTC AGCAGCACTG ACGCGGTGAC GTTGAAAATC
GATCCGGCAG TCGTGCTAGC AACGCGGGGC TATGTTGATG ATGCTATCAA TGCACATGAA
AAAAGCCGCA AACACCCTGA CGGCACGTTA AACGCAAAGG GATTCGTGCA ACTTAGCAAC
GCGACGAACA GCGACAGTGA GCTACTGGCC GCAACCCCTA AAGCGGTGAA AGCGGCCGTT
ACTGCTGCCA ACAATGCCGC CACCGCAGCA GCTAACGCGA ATACCAACGC CAATGGCCGC
GTGCCGTCTG CACGGAAAGT GAACGGTAAA GAACTGACAG CAGATATCGC CCTTATTGCT
GCCGATGTGG GGGCGTATAC CAAAGCAGAA ACTGATACCC GTGTTGCCAC GGCAACCACT
GCTGCCAACA ATGCCGCCAC CGCAGCGGCT AACGCGAATA TCAACGCCAA TGGCCGCGTG
CCGTCTGCAC GGAAGGTTAA CGGTAAAGCG CTAACGGCTG ATATCGCCCT TACTGCCACC
GATGTAGGGG CATATACCAA AGCAGAAACT GATACCCGCG TTGCCACGGC AACCACCGCT
GCCAACAATG CCGCCACCGC AGCGGCTAAC GCCAACACGA ACGCTAATGG CCGCGTGCCG
TCCGGGCGTA CCGTCAACGG TAAAGCGCTG TCGGCAGATA TCGCGCTGGG TGCCGGGGAT
GTGGGGGCAT ACACCAAAGC GGAAACCGAC ACCCGCGTCA CCGCAGCAAC CACCGCCGCG
AATAATGCCG CTACGGCAGC GACCAACGCG AATACCAACG CTAATGGCCG CGTGCCGTCA
GGGCGTACCG TTAACGGCAA AGCGCTATCG GCAGATATCG TGCTCACTGC TGGTGACGTT
GGTGCGCTGA CTGCGGGTGG CACTGCGGCT GCGGCTACTA AGCTGGCTAC AGCCCGCAAA
ATCAACGGCG TGGCATTTGA CGGTTCGGCA GATATTATCG TTGATTCTGA CTGGTCACAG
ATTAAAAACG TTCCCGCGGC ATCATATGAC GTCGCGGGTG TGGTGGTGTT GAGCTCGTCA
ATTAACAGTA ATAGCAGAAC TATTGCTGCG ACAGCGCAGC AGCTTTTTAC GGCTCACTCT
ATTGCAACTA ACGCGCTGGC AAAAGCGACT GCGGCGTTGC CAGCGGATGG AACTGCGGCG
GCGGCGACTA AATTGGCGAC CCCCAGAAAA ATTAATGGCG TAGCATTTGA TGGTACATCG
GACATTGATC TAAATGGGTC ACGAGTATGG ATTTCGGGTG AGTACACGCC TGCAACCAGC
ACGCCAATCG TAGTGTCTCA CGGATTGGTC GGTATTAATC CCCTGCACTG TCGTTGCGAT
GTGTTGGTTA AATGTGTCGT CGCAGAAGGC GAATACCGCG CTGGTGAGTT TGCGATTAAT
CCCATGACAC TTTTTATGCA GCAAGGTGTC GCCCATCCCT ATTCGTTGTT GCCAGCATTA
AATGCAGGCA CTGTGCAGTT GAACATCATG CACTATCTGG CTGCGTCATT TAAAACCAGC
ACGATAGGCA ATCAGCAACT GAATATGGCT AATTGGCGTT GTATTCTTCG TATTTTTTAT
TAG
 
Protein sequence
MSTKYFVLLT NIGAAKLANA TVLGSHLDIT HMAVGDGGGT LPTPNPAQTA LINEKRRAGI 
NTLSVDPVNT NQIIAEQVIP ENEGGFWIRE IGLFDADGDL VAIGNCAETY KPLLQEGSGR
IQTVRMILIV SSTDAVTLKI DPAVVLATRG YVDDAINAHE KSRKHPDGTL NAKGFVQLSN
ATNSDSELLA ATPKAVKAAV TAANNAATAA ANANTNANGR VPSARKVNGK ELTADIALIA
ADVGAYTKAE TDTRVATATT AANNAATAAA NANINANGRV PSARKVNGKA LTADIALTAT
DVGAYTKAET DTRVATATTA ANNAATAAAN ANTNANGRVP SGRTVNGKAL SADIALGAGD
VGAYTKAETD TRVTAATTAA NNAATAATNA NTNANGRVPS GRTVNGKALS ADIVLTAGDV
GALTAGGTAA AATKLATARK INGVAFDGSA DIIVDSDWSQ IKNVPAASYD VAGVVVLSSS
INSNSRTIAA TAQQLFTAHS IATNALAKAT AALPADGTAA AATKLATPRK INGVAFDGTS
DIDLNGSRVW ISGEYTPATS TPIVVSHGLV GINPLHCRCD VLVKCVVAEG EYRAGEFAIN
PMTLFMQQGV AHPYSLLPAL NAGTVQLNIM HYLAASFKTS TIGNQQLNMA NWRCILRIFY