Gene PC1_2645 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_2645 
Symbol 
ID8133593 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand+ 
Start bp3006003 
End bp3006509 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content58% 
IMG OID644865928 
Producthead completion protein 
Protein accessionYP_003018211 
Protein GI253689021 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones3 
Plasmid unclonability p-value0.00983423 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCTGA TTGCAACAGA GCCGGTAAGG CCAGCCACGC AGGACACCAT CAACGATGGG 
GATGCGACAG TGACGAGCCA TGCATTCTGG CCGGTGATTG TCCTGTCCGC TCTGCGTCGT 
GCGATGCGTC TTGACGGGCA AGTGACAACG GATCGCCTGA TGGATAAGGC CATAGAAGCG 
GTTGCGCACG TTAACGGCCA GTTGGCCGAC TGGCGAAACA GCCAAGAGCA ACGTGGGCTT 
GCCGTTCTGT CAGAGGTTAA ACCCGATGGC GCTGACGAAA TCGACCAGAT CAATGGCGAG 
TCCGTTTTGG TCTGGCGCTA CCGCCGTGCG GTGTATTCCA TCACCAAAGC GCTGTTGATT 
GAGGGTTACC GTGATATTGA CACCACGCGC GAAGGGGAAA AGCACGCAGA GGCGTTGAGT 
TCACAGATTG ACACGCTGTG GCGCGACGGC CGCTGGGCAA TACGCGACAT CCTCGGCGTT 
AATCGTGGTC TGGCTGAGTT GGTCTGA
 
Protein sequence
MSLIATEPVR PATQDTINDG DATVTSHAFW PVIVLSALRR AMRLDGQVTT DRLMDKAIEA 
VAHVNGQLAD WRNSQEQRGL AVLSEVKPDG ADEIDQINGE SVLVWRYRRA VYSITKALLI 
EGYRDIDTTR EGEKHAEALS SQIDTLWRDG RWAIRDILGV NRGLAELV