Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_2610 |
Symbol | |
ID | 8133558 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 2976392 |
End bp | 2976889 |
Gene Length | 498 bp |
Protein Length | 165 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 644865893 |
Product | purine-binding chemotaxis protein |
Protein accession | YP_003018176 |
Protein GI | 253688986 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0835] Chemotaxis signal transduction protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.477364 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTGGAC TTGCAAGCGT CACGAAATTA ACTGGCGAAA CAGTAGGACA GGAATTCCTG ATTTTTACGC TGGGTGACGA AGAGTACGGC GTTGATATTT TAAAAGTACA AGAAATTCGC GGTTATGACC AGGTAACGCG CATTGCCAAC ACGCCTTCTT TCATCAAAGG TGTCACCAAT CTACGCGGTG TCATTGTACC GATCGTTGAC TTGCGCATTA AATTCGCCAA GCAGGATGTT GAATACGATG ACAACACGGT TGTTATTGTT CTGAATCTTG GTCAGCGTGT CGTAGGTATT GTCGTCGATG GCGTGTCTGA TGTGTTGTCA TTGACCGCAG ATCAAATTCG CCCTGCGCCG GAGTTTGCCG TAACTCTGTC AACAGAATAC CTGACTGGTT TGGGCTCTTT AGGCGAGAGA ATGCTGATTC TGGTTGATAT CGAAAAACTG TTGAGCAGCG AAGAAATGGC GCTGGTTGAT AGCGTATTAA AAGTCTAA
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Protein sequence | MTGLASVTKL TGETVGQEFL IFTLGDEEYG VDILKVQEIR GYDQVTRIAN TPSFIKGVTN LRGVIVPIVD LRIKFAKQDV EYDDNTVVIV LNLGQRVVGI VVDGVSDVLS LTADQIRPAP EFAVTLSTEY LTGLGSLGER MLILVDIEKL LSSEEMALVD SVLKV
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