Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_2596 |
Symbol | flgD |
ID | 8133544 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 2963847 |
End bp | 2964521 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 644865880 |
Product | flagellar basal body rod modification protein |
Protein accession | YP_003018163 |
Protein GI | 253688973 |
COG category | [N] Cell motility |
COG ID | [COG1843] Flagellar hook capping protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.661244 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTGTAA CTATTAATGA TACTTCCTCG GCACAGAGTA CATCGAGTGT CTCGTCGACA ACGGCGGTAG AGAAAAATAG TAGTGCCGAC CTACAGAACC AGTTTCTGAC GCTTTTGGTT GCGCAGTTGA AGAATCAGGA TCCAACGAAT CCGATGAGCA ACGATCAGCT TGTTAGCCAG CTTGCTCAGC TCAATACAGT GAGTGGTATT GAAAAACTGA ATACCACCTT GGGTTCTATT TCCGGCCAGA TCAATAACAA CCAATCCATG CAGGCAACGA CGCTGATTGG TCATAGTGTC ATGATCCCTG GAAAAGACAT TCTTGTGGGT AAAGAAACCA GTACTCCCTT TGGTGTGGAA CTGGAGAAAG CCGCAGAAGT CGTTACTGTC ACCGTTAATG ATGCGACTGG TAAAGCCGTT CGCACGATCG AATTGGGGAC GCTTTCTGCC GGTGTTCACT CGTTTAACTG GGATAGTAAG CTTTCTGATG GCACGGTTGC GCCTGATGGT GCTTATACCT TCACTGTCGC TGCCAGCACG GGCGGCGCGC AGCAAGTTGT TCAGCCATTG AGCTATGCGG TTGTAAATAG TGTCGTTCGC GGCGATAGCG GTGCATTGCT GGATTTAGGA CTGCGTGGCA GAGCCACCAT GGACGATGTC CGGCAGATTC TGTAA
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Protein sequence | MSVTINDTSS AQSTSSVSST TAVEKNSSAD LQNQFLTLLV AQLKNQDPTN PMSNDQLVSQ LAQLNTVSGI EKLNTTLGSI SGQINNNQSM QATTLIGHSV MIPGKDILVG KETSTPFGVE LEKAAEVVTV TVNDATGKAV RTIELGTLSA GVHSFNWDSK LSDGTVAPDG AYTFTVAAST GGAQQVVQPL SYAVVNSVVR GDSGALLDLG LRGRATMDDV RQIL
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