Gene PC1_2595 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_2595 
SymbolflgE 
ID8133543 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp2962554 
End bp2963771 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content49% 
IMG OID644865879 
Productflagellar hook protein FlgE 
Protein accessionYP_003018162 
Protein GI253688972 
COG category[N] Cell motility 
COG ID[COG1749] Flagellar hook protein FlgE 
TIGRFAM ID[TIGR03506] fagellar hook-basal body proteins 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTTTTT CTCAGGCGGT CAGTGGCTTA AACGCGGCAT CTAATAACCT GGATGTTATC 
GGTAATAACA TCGCTAACTC AGCAACAGTA GGTTTTAAAT CCGGTACTGT CACATTTGCC
GATATGTTTG CAGGCTCTAA AGTGGGTATG GGTGTGAAGG TTGCATCGGT ATTGCAGGAT
TTCGGTAATG GTACCGTCAC CTCCTCTTCA CGAGACCTGG ATATTGCGAT TAGCGGCGGT
GGTTTTTACC GTCTGCAGGA TACCAACGGC TCCGTCTATT ACAGCCGTAA TGGTCAATTC
ATGCTGAACG GCCGTAATAT TGTCAACGCA CAAGGTATGC AACTGACGGG TTACCCGGTA
GCGGGGACGC CTCCAGTTGT TCAAACGGGT GCCGATCCCG TTCCGTTGAC GATTCCTGAT
GGCGACATGT TAGCGAACCG TACGACAACT GCGTCCATTA AAGCCAACCT GAAATCTTCA
GACTCAGTTC CAGCAAACTC CTGGGCGACA ACACCTGGTG GAGAAGGTAC CTATAACAGC
AAAACTGCAC TAACAACCTA TGACGGTCAG GGTAACGTGC ATAACTACAC GCTGTATTTT
GTCAAAACGG CGAATAATAC GTGGCAGACG TATGCGAAAG ATGACGCAGT CACCCCTGCC
ACTTATCAAA ATGCTGGAAC GCTGAATTTT GAAGCAAATG GTGCTTTAAG TTCCACCGGC
GCCACTGCCC ATACGCCTTT TACTATCAAC ATGACTGGGA CGAATGGCGC GGCAGGTGGT
ACGTTCACTC TCGATTTGAC GGGAAGCGTG CAGCAAAATA CCGAATATAG CTACAAGAGC
CCAACTCAGA ATGGTTTCGG CCCAGGATCG CTGACTGGCT ATGCTATCAA TGACGACGGT
ACTATCGTGG GTAGCTATAG TAATGGTCAG AAACAGGCTC TGGGTCAGAT TCTTCTGGCT
GGTTTTGCTA ACCCAGAAGG TTTATCACCT GAAGGCGACA ACGCGTGGTC TGAAACGGCA
AGCTCTGGTC AGGCTGTTGT CGGTCTCGCT GGTAGCGGAA ACCTGGGTAA GTTAGTGGGT
AAATCCACCG AAATGTCGAA CGTTGATTTG AGTAAAGAGC TGGTCAACAT GATTGTTGCG
CAGCGTAACT ACCAGTCGAA TGCGCAAACC ATCAAAACGC AGGATTCCAT TCTGCAAACG
CTGGTTAGCC TGCGTTAA
 
Protein sequence
MGFSQAVSGL NAASNNLDVI GNNIANSATV GFKSGTVTFA DMFAGSKVGM GVKVASVLQD 
FGNGTVTSSS RDLDIAISGG GFYRLQDTNG SVYYSRNGQF MLNGRNIVNA QGMQLTGYPV
AGTPPVVQTG ADPVPLTIPD GDMLANRTTT ASIKANLKSS DSVPANSWAT TPGGEGTYNS
KTALTTYDGQ GNVHNYTLYF VKTANNTWQT YAKDDAVTPA TYQNAGTLNF EANGALSSTG
ATAHTPFTIN MTGTNGAAGG TFTLDLTGSV QQNTEYSYKS PTQNGFGPGS LTGYAINDDG
TIVGSYSNGQ KQALGQILLA GFANPEGLSP EGDNAWSETA SSGQAVVGLA GSGNLGKLVG
KSTEMSNVDL SKELVNMIVA QRNYQSNAQT IKTQDSILQT LVSLR