| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2587 |
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| Symbol | fliR |
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| ID | 8133535 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 2954049 |
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| End bp | 2954834 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644865871 |
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| Product | flagellar biosynthesis protein FliR |
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| Protein accession | YP_003018154 |
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| Protein GI | 253688964 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1684] Flagellar biosynthesis pathway, component FliR |
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| TIGRFAM ID | [TIGR01400] flagellar biosynthetic protein FliR |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCTGACGT TTAACAGTTG GGACATGGTG AATTGGGTCA GCCAGTTTTT CTGGCCTTTT
GTCAGAATTC TTGCGTTGAT TAGCACTGCG CCTGTCTTTA ACGAAAGAGC AATTGGGAAC
CGGGTGAAAA TTGGTCTGGG TGTGCTGATC ACCCTACTGG TTGCGCCCTA TTTGCCATTA
AACACCACGC CTATCTTTTC CGTCGCGGGT ATATGGCTGT TAATACAGCA AGTTCTCATC
GGCGTTACTC TCGGCCTGTC AATGCAGTTA GCATTTGCCG CAATTCGCCA TGCCGGCGAA
CTTATTGGTT TACAGATGGG GCTCGCCTTT GCGACCTTTT TTGATCCCAC TGGCGGCCCG
AATATGCAGG TAATAGCGCG TTTTCTGAAT ATTCTTGCCA TCTTACTGTT CCTAACATTT
GATGGTCATC TCTGGATGAT TTCGTTATTA GCAGATAGCT TCTATACTCT GCCCATTAGC
ACCAATCCTA TTAACAGCCA TGCCTTTCTC GCGCTTGCAC GTGCCGGTGG ACTGATTTTT
ATTAACGGAT TGATGCTGGC GCTGCCAATC ATCACCCTGC TGCTAACCAT TAACCTGGCC
TTAGGCATGC TTAACCGCGT TGCCCCACAG CTCTCGATAT TTGTCGTGGG TTTCCCGATA
ACCCTTACTG TGGGTATCAT GACGCTAGGT TTGTTAATTC CGTTAATCCC ACCATTTGCA
GAGCACTTAT TCAGCGAAGT TTTCGATTTA CTCGCTGATA TCCTTACCCA GCTATCCAGC
CCCTAA
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| Protein sequence | MLTFNSWDMV NWVSQFFWPF VRILALISTA PVFNERAIGN RVKIGLGVLI TLLVAPYLPL
NTTPIFSVAG IWLLIQQVLI GVTLGLSMQL AFAAIRHAGE LIGLQMGLAF ATFFDPTGGP
NMQVIARFLN ILAILLFLTF DGHLWMISLL ADSFYTLPIS TNPINSHAFL ALARAGGLIF
INGLMLALPI ITLLLTINLA LGMLNRVAPQ LSIFVVGFPI TLTVGIMTLG LLIPLIPPFA
EHLFSEVFDL LADILTQLSS P
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