Gene PC1_2579 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_2579 
SymbolfliJ 
ID8133527 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand+ 
Start bp2948763 
End bp2949209 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content47% 
IMG OID644865863 
Productflagellar biosynthesis chaperone 
Protein accessionYP_003018146 
Protein GI253688956 
COG category[N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2882] Flagellar biosynthesis chaperone 
TIGRFAM ID[TIGR02473] flagellar export protein FliJ 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.153139 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACCC AGTCACCGCT GGTTACACTA CGCGAACTGG CGCAGAAAGA GGTTGAGAAA 
GCAGCAGGCC AGTTGGGACA GGTGCGTCAG GCGCATCAAC AGGCAGAACA GCAGCTCAAT 
ATGCTGTTAA ACTATCAGGA TGACTATCGT CAAAAATTGA ACTCGACGAT GTCTGCTGGT 
ATGGCGAATA ATAGCTGGCA GAATTATCAG CAGTTCATCC GAACGCTGGA CAGTGCAATT 
GAGCAACACA GACAACAGCT CTCGCAGTGG ACATCACGTT TAGATTTAGC AATGAAGACC 
TGGCAAGAAA AGCAGCAGCG ATTGAACGCC TTTGAGAAAC TGCAAGATCG TGAGTTGACA 
AGACAGCTTG CCAAAGAAAA CAAAATAGAA CAAAAACAAA TGGATGAATT TGCCCAACGG 
GCCTCACAGA GGAAAGCAGA ATCATGA
 
Protein sequence
MKTQSPLVTL RELAQKEVEK AAGQLGQVRQ AHQQAEQQLN MLLNYQDDYR QKLNSTMSAG 
MANNSWQNYQ QFIRTLDSAI EQHRQQLSQW TSRLDLAMKT WQEKQQRLNA FEKLQDRELT 
RQLAKENKIE QKQMDEFAQR ASQRKAES