Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_2563 |
Symbol | |
ID | 8133511 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 2930737 |
End bp | 2931477 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 644865847 |
Product | Methyltransferase type 12 |
Protein accession | YP_003018130 |
Protein GI | 253688940 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAATCA ACAGAAATTA TGATCAGGAA ATTAAGGATA CAGCAGGACA TAAATACGCC TATAATTTCG ACTTCGATGT GATGCATCCT TTTATGGTTC GTGCATTTAC TCCTTTCTTT CGTCCAGGAA ATTTATTGGA GCTAGGGAGC TTCAAAGGTG ATTTTACTTC ACGGCTACAG GAACATTTCA ACGATATCAC ATGCGTTGAA GCTTCCGCAG AAGCGATTTC ATATGCTAAA GGTCGGTTAA AAGACGGAGT AACTTATATT CATTCACGCT TTGAAGATGT TCAATTACCT CGTCGTTACG ATAATATTGT ATTGACGCAT GTGCTTGAGC ATATTGATGA CCCCATCGCT TTGCTTAAGC GTATTAATGA TGAATGGTTA GCGGAAGGAG GACGTTTATT CCTCGTTTGC CCTAATGCTA ATGCAGCTTC CCGCCAGATA GCCGTAAAAA TGGGGATTAT TTCCCATAAT TCGGCGGTGA CTGAAGCAGA GTTTGAGCAT GGACATCGTT GTACGTATGC ACTGGATACA CTTGAGCGCG ACGCGAGTCT TGCTGGATTA CACGTTGCCT ACCGTTCAGG TATATTCTTT AAAGCTTTAG CGAATTTTCA ATGGGACAAA TTATTGCAAA CCGATATCAT AACAAATGAA TATTTAGAAG GTTGCTATCA GTTGGGTCAA CAATACCCTG ATCTTTGTTC TAGTATATTT TTATTGTGTG AAAAAAAATA A
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Protein sequence | MTINRNYDQE IKDTAGHKYA YNFDFDVMHP FMVRAFTPFF RPGNLLELGS FKGDFTSRLQ EHFNDITCVE ASAEAISYAK GRLKDGVTYI HSRFEDVQLP RRYDNIVLTH VLEHIDDPIA LLKRINDEWL AEGGRLFLVC PNANAASRQI AVKMGIISHN SAVTEAEFEH GHRCTYALDT LERDASLAGL HVAYRSGIFF KALANFQWDK LLQTDIITNE YLEGCYQLGQ QYPDLCSSIF LLCEKK
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