Gene PC1_2563 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_2563 
Symbol 
ID8133511 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp2930737 
End bp2931477 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content40% 
IMG OID644865847 
ProductMethyltransferase type 12 
Protein accessionYP_003018130 
Protein GI253688940 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAATCA ACAGAAATTA TGATCAGGAA ATTAAGGATA CAGCAGGACA TAAATACGCC 
TATAATTTCG ACTTCGATGT GATGCATCCT TTTATGGTTC GTGCATTTAC TCCTTTCTTT
CGTCCAGGAA ATTTATTGGA GCTAGGGAGC TTCAAAGGTG ATTTTACTTC ACGGCTACAG
GAACATTTCA ACGATATCAC ATGCGTTGAA GCTTCCGCAG AAGCGATTTC ATATGCTAAA
GGTCGGTTAA AAGACGGAGT AACTTATATT CATTCACGCT TTGAAGATGT TCAATTACCT
CGTCGTTACG ATAATATTGT ATTGACGCAT GTGCTTGAGC ATATTGATGA CCCCATCGCT
TTGCTTAAGC GTATTAATGA TGAATGGTTA GCGGAAGGAG GACGTTTATT CCTCGTTTGC
CCTAATGCTA ATGCAGCTTC CCGCCAGATA GCCGTAAAAA TGGGGATTAT TTCCCATAAT
TCGGCGGTGA CTGAAGCAGA GTTTGAGCAT GGACATCGTT GTACGTATGC ACTGGATACA
CTTGAGCGCG ACGCGAGTCT TGCTGGATTA CACGTTGCCT ACCGTTCAGG TATATTCTTT
AAAGCTTTAG CGAATTTTCA ATGGGACAAA TTATTGCAAA CCGATATCAT AACAAATGAA
TATTTAGAAG GTTGCTATCA GTTGGGTCAA CAATACCCTG ATCTTTGTTC TAGTATATTT
TTATTGTGTG AAAAAAAATA A
 
Protein sequence
MTINRNYDQE IKDTAGHKYA YNFDFDVMHP FMVRAFTPFF RPGNLLELGS FKGDFTSRLQ 
EHFNDITCVE ASAEAISYAK GRLKDGVTYI HSRFEDVQLP RRYDNIVLTH VLEHIDDPIA
LLKRINDEWL AEGGRLFLVC PNANAASRQI AVKMGIISHN SAVTEAEFEH GHRCTYALDT
LERDASLAGL HVAYRSGIFF KALANFQWDK LLQTDIITNE YLEGCYQLGQ QYPDLCSSIF
LLCEKK