Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_2508 |
Symbol | |
ID | 8133454 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 2874276 |
End bp | 2874797 |
Gene Length | 522 bp |
Protein Length | 173 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 644865790 |
Product | hypothetical protein |
Protein accession | YP_003018075 |
Protein GI | 253688885 |
COG category | [R] General function prediction only |
COG ID | [COG1399] Predicted metal-binding, possibly nucleic acid-binding protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000257627 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAAAGG TAAAATTACC CTTAACCCTT GATGCGGTCC GCACTGCTCA GAAGCGTTTA GACTACGTTG GTATCTATTC GCCAGAACAA GTAGAGCGTG TTGCCGAATC AGTGGTGAGT GTGGATAGTG ATGTTCAGGC CTCTTTATCT TTCAATATTG ATAATCAGCG TCTGGCAGTG ATTGACGGTA ACGCCGATGT TACGGTCACA CTGATGTGTC AACGTTGCGG AAAGCCGTTT GAGCATCAAG TCCATGCGAC ATTCTGTTTT AGCCCGGTCG TCAATGATGA GCAGGCCGAA GCGTTACCGG AAGCGTATGA GCCGATCGGC GTTGATGAGT TTGGCGAAGT CGATCTGCTG GCAATGATTG AAGATGAAAT TATTCTGATG TTGCCTATCG CCCCGGTGCA TGATTCTGAA CACTGTGAAG TGTCCGAAGC GGACATGGTG TTTGGCCAAC TGCCTGAAGA GGCGGAAAAA CCAAATCCGT TTGCCGTATT AGCAAGTTTA AAGCGTAAGT AA
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Protein sequence | MQKVKLPLTL DAVRTAQKRL DYVGIYSPEQ VERVAESVVS VDSDVQASLS FNIDNQRLAV IDGNADVTVT LMCQRCGKPF EHQVHATFCF SPVVNDEQAE ALPEAYEPIG VDEFGEVDLL AMIEDEIILM LPIAPVHDSE HCEVSEADMV FGQLPEEAEK PNPFAVLASL KRK
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