| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2439 |
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| Symbol | |
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| ID | 8133385 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 2798770 |
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| End bp | 2800671 |
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| Gene Length | 1902 bp |
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| Protein Length | 633 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 644865721 |
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| Product | PTS system beta-glucoside-specific transporter subunits IIABC |
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| Protein accession | YP_003018006 |
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| Protein GI | 253688816 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1263] Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific |
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| TIGRFAM ID | [TIGR00826] PTS system, glucose-like IIB component
[TIGR00830] PTS system, glucose subfamily, IIA component
[TIGR01995] PTS system, beta-glucoside-specific IIABC component |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0118762 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAATACA AAGCATTAGC AAGTGAGATA CTCGATGGTG TCGGCGGACG CGGCAACGTC
ATTAGCGTCA TGCACTGCGC AACCCGATTA CGTTTTAAAT TAAAAGATAA CAAAAAAGCG
GATGCCGTGG CGCTGAAGGA TAACTCAGGC GTGATCATGG TCGTTGAAAG CGGCGGGCAA
TTTCAGGTTG TCGTAGGCAA TCATGTTAGT GATGTCTATA ACAGCTTGTT GGATATTTCT
GGATTGACCG ACAGGACGGA TTCCGCGAAT CATGAAGACG GCGATGAGAA AAAAGGAAAT
ATCTTTTCGC GCTTCATTGA TATTATTTCT GGAATATTTA CCCCGTTAAT TGGGGTGATG
GCAGCATCGG GTATTTTAAA AGGTTTTCTG GCGCTCAGTC TGGCGTGTGG TTGGATGGTT
GAAACCAGTG GAACCTATAA AGTGTTGTTT GCGGCAAGCG ATGCATTATT CTTTTTCTTC
CCGGTAGTAT TAGGCTATAC AGCAGGGAAA AAGTTTGGTG GCAATCCATT TGTTACCATG
GTAATTGGTG CCACGCTGGT GCATCCATCC ATGATTGCCG AATTTGGTGC CATGCAGAAT
GCAGGTTATC AACAGCTGTA TTTCCTTGGC ATTCCGATTA CCTTCATCAA TTATGCCTCT
TCAGTTATTC CGATTATTTT CTCGGCCTGG CTTGCTTCAC GTCTGGAAAA ACCGCTGAAT
GCCATCTTGC ATATTAATAT CCGCAATTTC TTTACGCCGC TGCTGTGCCT CTGCATTACG
GTTCCCGTCA CGTTCTTGCT GATTGGCCCT GCGGCAACCT GGCTTGGGCA CATGCTGGCC
AGCGGTTACC AGTTAATCTA CGGGCTGAAC TCCATGATCG CGGGTGCGTT GATGGGCGCA
CTGTGGCAGG TGTTTGTTAT TTTTGGTCTG CATTGGGGGC TAACGCCGCT GATGATCAAT
AACCTCAGCG TATTGGGGCA TGACACTATG ATGCCGCTAC TGGTTCCTGC GGTATTAGGG
CAGGCGGGAG CGGTACTGGG TGTGTTGCTG CGTACGCGTG ATATGAAGCT AAAAGGGATT
TCCGGTTCCG CTTTCTCGGC TGCGATCTTT GGTATTACGG AACCGGCGGT GTATGGCGTT
ACGCTGCCGC TGAAGCGTCC TTTCATTTTT GGTTGTGTTG GTGGCGCAAT GGGTGCCGCC
ATTCTGGGAT ATTTCCATAC CACTATCTAT TCCTTTGGTT TCCCGAGCAT CTTCACCTTT
ACTCAGGTTA TCCCGCCGTC AGGTGTTGAT AACACGGTCT GGGCCGCCAT TATTGGGACG
GTGATTGCTT TTACCTTTGC CGCCGCCGCG AGTTGGGCCT TCGGCATTCC GTCTCAAGAA
ACTACGAAAG AAATCAATAC ATCCACGGCA ACGCCGCAAG CCACACCACG TCAGAGCGAT
ACCACGCGTA AGCAAGAGAT AAGCAGCCCG ATTGCGGGAA CGGTGCTTCC GCTTGAGCAG
GTCGGTGATG AAACCTTCGC CAGTGGCTTA ATGGGGAAAG GGATCGCGAT TAAACCGCAG
GCCGGACGTG TGGTTTCACC CGTGAGTGGC ACGGTTGCCT CGCTGTTCAA AACCAACCAT
GCGATTGGAC TCGAGTCGGA AGAGGGAGCC GAGGTGCTGA TTCACGTCGG TATCGATACG
GTGAAATTGG ATGGTCAGTA TTTCACCGCA CACATTAAAA CCGGCGATGT TGTGAAGCAG
GGCGATCTTC TGGTGGAGTT TGATTATCAG GCGATTGAGA AAGCCGGTTA TGACACAACA
ACGCCTGTCA TTATCACCAA TAGCGAAGAT TACGTTGATG TTCTGCCTAC CGCCGGAAAC
GCCGTGCAGG AGCAAGGCGC CTTACTGACG TTAATTCGCT GA
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| Protein sequence | MEYKALASEI LDGVGGRGNV ISVMHCATRL RFKLKDNKKA DAVALKDNSG VIMVVESGGQ
FQVVVGNHVS DVYNSLLDIS GLTDRTDSAN HEDGDEKKGN IFSRFIDIIS GIFTPLIGVM
AASGILKGFL ALSLACGWMV ETSGTYKVLF AASDALFFFF PVVLGYTAGK KFGGNPFVTM
VIGATLVHPS MIAEFGAMQN AGYQQLYFLG IPITFINYAS SVIPIIFSAW LASRLEKPLN
AILHINIRNF FTPLLCLCIT VPVTFLLIGP AATWLGHMLA SGYQLIYGLN SMIAGALMGA
LWQVFVIFGL HWGLTPLMIN NLSVLGHDTM MPLLVPAVLG QAGAVLGVLL RTRDMKLKGI
SGSAFSAAIF GITEPAVYGV TLPLKRPFIF GCVGGAMGAA ILGYFHTTIY SFGFPSIFTF
TQVIPPSGVD NTVWAAIIGT VIAFTFAAAA SWAFGIPSQE TTKEINTSTA TPQATPRQSD
TTRKQEISSP IAGTVLPLEQ VGDETFASGL MGKGIAIKPQ AGRVVSPVSG TVASLFKTNH
AIGLESEEGA EVLIHVGIDT VKLDGQYFTA HIKTGDVVKQ GDLLVEFDYQ AIEKAGYDTT
TPVIITNSED YVDVLPTAGN AVQEQGALLT LIR
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