| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2434 |
|---|
| Symbol | |
|---|
| ID | 8133380 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012917 |
|---|
| Strand | - |
|---|
| Start bp | 2791911 |
|---|
| End bp | 2793605 |
|---|
| Gene Length | 1695 bp |
|---|
| Protein Length | 564 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 644865716 |
|---|
| Product | sulfatase |
|---|
| Protein accession | YP_003018001 |
|---|
| Protein GI | 253688811 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG3119] Arylsulfatase A and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATACCT TTGTACGTAG CGCAATTGCG TTATGTTGTT TACAGGCACT AAGCGGTTCG
GTGCTTGCGG CAGACAATGT GACGGCTAAT AAAGCAGGTA GTAACGCCGA ATCACAACGT
CCAAATATTG TTTATATTTT ACTCGACGAT CAACGGTATG ACGCATTTGG TTTTATCAAT
AAGAACATCC AGACGCCACA TATGGATGAA ATTGCAAAAA ATGGTACTTG GTTTAAAAAT
GCGTTTGTTA CCACCTCTCT TTGCTCACCC AGTCGCGCCA GTATTTTGAC AGGGATGTAT
GTGCATAATC ATGGTGTGTC AGATAACAAT CCGACAGACT TGTCAAAACT GAATTATTTC
CCAGAAAAAT TGAAAGAGCG TGGCTATCAA ACCGGTTTCT TTGGCAAATG GCACTTTGGT
GGCGCAGATT ACACCGCTAA AGCTGGTTTT GCTGGTTTTG ACCGTTGGGT CGGGTTATTG
GGCCAAGGGG ACTACTACCC AATAAATATG TTTGGTGAAC AGGCAAAGCT GAATATTGAT
GGGAAAATGG TTCCACAAAA AGGATACATT ACCGACGAGT TGACCGACTA CGCGGTTAAC
TGGTTAGACG GTATTGATAA GAAAAAACCT TTCATGATGT ATTTATCGCA TAAAGGGGTT
CATTCTGATT TTTATCCGGC AATCAGGCAC AAAGGGTCGA TGGATAAAGT CACTTTCCCA
CTGCCAGAGA CGTATGCTGA TACACCAGAA AATTACGAAG GAAAACCGAT GTGGGTTAAA
AACCAGCGTA ATAGCTGGCA TGGTGTAGAT TATCCTTATA ATAAGAAAAT GGATATGCAG
CAATTCCAGC GTGATTATTA TGAAACGCTG CGCTCGGTCG ATGATAGTGT CGGCCGTGTT
CAGGAATGGC TGAAGAAAAA TGGACTGGAT AAAAATACCA TAGTCATGGT TATGGGGGAT
AACGGCTTCA CCTTTGGCGA ACATGGATTG ATCGACAAGC GTAGTGCCTA TGAAACATCA
ATGCGTGTTC CACTTATTGC ATCAGGACCT GGTTTCGGCA AAGGGGATGT TGTTGAAGAT
TTAGTCGCCA ATATTGATAT TGCACCGACA TTCCTGGAAG CAGCGGGTGC GGAAAAACCG
AAGAACTATG ATGGTAATAG CTTCCTGAAT ATAAAATCGG ATAAAGAAAA ACAGGCAAAA
CGCAAAGACT ATTTCGCCTA TGAATACTTC TGGGAATACG ATTTTCCTTA TACTCCGACG
ACATTTGCCA TTCGTACACC AGAATATAAA TATATTCAGT ACTACGGGAT TTGGGATAAG
GAAGAGCTGT ATGACATGAA GAACGATCCG GATGAAAAAC AAAATCTGAT TGATTCTAAA
GATAAAAAAC TGATTGAGAC GAAGATCGCT CTCCGTAAGC AATTGTATAT GGAGCTGAAG
GATCATGATG ACAGAAACGT TATCCCTTAC AACCAAAGGA CAAAGGAAGG GCAAGTTTTC
CGTTATCAAG AGACAGGCAA GAAAATGGCA GACTTTCCTG ATGAGTGGCT ACGTGGTGAT
AACCCTCGTG ACAAGTATTC AGGAATCATC CCGGAAACCG TAAATAAAGA TGCTGAAGGG
GAAAAAGTCT TTGCTTCATT CGAAAAGGCT GACCAAATGG TGAAAGAACT GATGAATAAA
AAGGCTGATA AATAA
|
|---|
| Protein sequence | MNTFVRSAIA LCCLQALSGS VLAADNVTAN KAGSNAESQR PNIVYILLDD QRYDAFGFIN
KNIQTPHMDE IAKNGTWFKN AFVTTSLCSP SRASILTGMY VHNHGVSDNN PTDLSKLNYF
PEKLKERGYQ TGFFGKWHFG GADYTAKAGF AGFDRWVGLL GQGDYYPINM FGEQAKLNID
GKMVPQKGYI TDELTDYAVN WLDGIDKKKP FMMYLSHKGV HSDFYPAIRH KGSMDKVTFP
LPETYADTPE NYEGKPMWVK NQRNSWHGVD YPYNKKMDMQ QFQRDYYETL RSVDDSVGRV
QEWLKKNGLD KNTIVMVMGD NGFTFGEHGL IDKRSAYETS MRVPLIASGP GFGKGDVVED
LVANIDIAPT FLEAAGAEKP KNYDGNSFLN IKSDKEKQAK RKDYFAYEYF WEYDFPYTPT
TFAIRTPEYK YIQYYGIWDK EELYDMKNDP DEKQNLIDSK DKKLIETKIA LRKQLYMELK
DHDDRNVIPY NQRTKEGQVF RYQETGKKMA DFPDEWLRGD NPRDKYSGII PETVNKDAEG
EKVFASFEKA DQMVKELMNK KADK
|
|---|
| |