| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2429 |
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| Symbol | |
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| ID | 8133375 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 2786283 |
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| End bp | 2787245 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644865711 |
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| Product | cytochrome c nitrite reductase, NrfD subunit |
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| Protein accession | YP_003017996 |
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| Protein GI | 253688806 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3301] Formate-dependent nitrite reductase, membrane component |
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| TIGRFAM ID | [TIGR03148] cytochrome c nitrite reductase, NrfD subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACGCCCG TGTCTTCAAG CGCATTCCAT TTTGATTCGT TGGTCTGGGA TTGGCCGATT
GCGATTTACC TGTTTCTGGT GGGCATTTCT GCGGGGCTGG TGACGCTGTC GGCCCTACTG
CGGCGCTACC ATCCCGAACA GGCAACCGCC GACAGTACGC TTATGCGCAC CACGCTGATT
CTCGCGCCGT GCACCATCAT TTTTGGATTG CTGATCCTGA TCTTCCACCT GACGCGCCCC
TGGACGTTCT GGAAGCTCAT GTTCCATTAC AGCTTTACCT CGGTGATGTC GGTCGGAGTC
ATGCTGTTTC AGGTATACAT GGCGGCGCTG GCTGTCTGGC TCGCCAATAT TTTTAGCGAG
CAGGTTATCG TGCTGCAACA GCGCTGGCTA CCGAAGCTGA CTCTCGTTCC CAAAGTGCTC
GGCTGGCTGG CGCCGCTGCA GAAATCGCTG GATATCGTGA TGTTGCTGCT GGCGGTGATG
TTAGGGGCTT ACACCGGATT CTTACTGTCC GCGCTGAAGA CTTATCCGCT GCTGAATAAC
CCGATCTTAC CGGCGTTGTT CCTGTTTTCA GGGGTGTCCT CTGGTGCCGC GGTAGCGTTG
ATCGCCATGG CCTGCCGCTA TCGTAATAAT CCGCATAGCG AAGAAGCGCA CTTTGTACAC
CGCGTTGAAA CACCGGTCGT GTGGCTGGAG ATCTTCTTGC TGTTTGCGTT CTTTATCGGC
TTGGCCTTAG GGGACGATGG GAAGCAGCGC GCGCTGGTGT CCGCACTGGC CGGGGGATTC
TGGGCCGTAT GGTTCTGGCT GGGTGTTGTC GGGATTGGAT TAGTCATTCC CTTGCTGCTC
AAGTCATGGG CTAGCCGGTT GCATTCACCT TATGGTGTGC TGGCGGTGTG TGGCATGAGT
CTGGTGGGCG TCCTGCTACT GCGCTTTTTT ATCCTCTATG CGGGGCAGTT AACCGTTGTC
TAA
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| Protein sequence | MTPVSSSAFH FDSLVWDWPI AIYLFLVGIS AGLVTLSALL RRYHPEQATA DSTLMRTTLI
LAPCTIIFGL LILIFHLTRP WTFWKLMFHY SFTSVMSVGV MLFQVYMAAL AVWLANIFSE
QVIVLQQRWL PKLTLVPKVL GWLAPLQKSL DIVMLLLAVM LGAYTGFLLS ALKTYPLLNN
PILPALFLFS GVSSGAAVAL IAMACRYRNN PHSEEAHFVH RVETPVVWLE IFLLFAFFIG
LALGDDGKQR ALVSALAGGF WAVWFWLGVV GIGLVIPLLL KSWASRLHSP YGVLAVCGMS
LVGVLLLRFF ILYAGQLTVV
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