Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_2402 |
Symbol | |
ID | 8133347 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 2760600 |
End bp | 2762774 |
Gene Length | 2175 bp |
Protein Length | 724 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 644865683 |
Product | catalase/peroxidase HPI |
Protein accession | YP_003017969 |
Protein GI | 253688779 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0376] Catalase (peroxidase I) |
TIGRFAM ID | [TIGR00198] catalase/peroxidase HPI |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACGAGA ATAAAACGAA ACCAGCCGGC AAATGTCCGG TTATGCACGG CGGAAATACG GCTACTGGCT CATCAAACAC GGACTGGTGG CCAAATGCCC TCAATCTCGA CATTCTTCAT CAGCATGATA CCAAGACCAA CCCGTTAGGC AGCGATTTCA GCTACCGCGA CGCTCTCAAA ACCCTCGATG TCGATGCCCT CAAGAAAGAC CTGCATGCAC TGATGACTGA CAGTCAGGAG TGGTGGCCGG CGGACTGGGG TCACTACGGC GGGCTGATGA TTCGTATGGC CTGGCACTCG GCGGGGACTT ACCGTACAGC CGACGGTCGC GGCGGCGGCG GAACGGGTAA CCAGCGTTTT GCACCACTCA ACTCCTGGCC GGATAACGTC AGCCTTGATA AAGCGCGTCG TTTACTGTGG CCAATCAAGA AAAAATACGG CAATAAACTC AGCTGGGCGG ATCTGATTAT TCTGGCGGGT AATATCGCGT ACGAATCTAT GGGGCTGAAA ACATTCGGTT TCGCCTTTGG GCGTGAAGAT ATCTGGCACC CGGAAAAAGA CATCTATTGG GGTTCCGAAA AAGAGTGGCT GGCGAAAAGC ACCGGGCGCT ACGGCAGCGA CGATCGTACC ACGCTGGAAA ACCCGCTGGC TGCTGTACAG ATGGGGCTGA TTTACGTTAA CCCGGAAGGC GTCGACGGCA ATCCCGATCC GCTGCGTACC GCACAGGATA TGCGCGTGAC CTTCTCCCGC ATGGCGATGA ATGATGAAGA AACCGTTGCC CTGACGGCGG GTGGACACAC GGTAGGCAAA ACCCACGGCA ATGGCGATGC CAGCCTGCTG GGTAAGGCGC CAGAAGGAAC GGATGTGGGT GAACAGGGTC TGGGCTGGCA TAACCCGACA GGATCGGGCA AAGGGCGCTA CACCGTCACC AGCGGGCTGG AAGGTGCCTG GACAACGCAT CCGACGCAGT GGGATAACGG CTTCTTCCAT ATGCTACTGA ATCACGAGTG GGAACTGAAA AAGAGTCCGG CGGGGGCATG GCAATGGGAA CCTGTCTTCA TTAAAGAAGA AGATAAACCG GTGGATGTTG AAGACCCGTC TATCCGTTAC AACCCGATGA TGACCGATGC CGATATGGCG CTGAAAGTTG ACCCAGAATA TCGCAAGATT TCCGAGCGCT TCTATCAGGA TCAGGCTTAC TTCTCCGAAG TGTTTGCCCG CGCGTGGTTC AAACTGACGC ACCGCGATAT GGGGCCGAAA ACGCGCTACC TCGGCCCGGA TGTACCGCAG GAAGATTTAC TGTGGCAGGA TCCGGTTCCG GCAGGCCGTA CCGACTATGA TGTCGATGTT GTCAAAGCAC GCATTGCAGA AAGTAGCCTG TCCATTAGTG AGCTGGTAGC CACCGCATGG GATAGCGCTC GCACGTTCCG TGGTTCTGAT ATGCGCGGCG GTGCTAACGG TGCGCGGATT CGTCTCGCCC CGCAGAAAGA TTGGGTAGGG AACGAACCGG AGCGTCTGGC GCGAGTGCTG GTCGTACTGG AAAATATTGC GGCCGCAACC GGGGCCAGCG TGGCCGATAC CATTGTGCTG GCAGGTAATG TCGGGATTGA GAAAGCGGCG AAGGCAGCGG GCGTGAATAT CACCGTGCCA TTTGCGCCGG GACGCGGCGA CACCACCGAT GCCCTGACCG ATGTGGAGTC TTTCGACGTT CTTGAACCGA TCCACGATGG CTACCGCAAC TGGCTGAAGA AAGATTATGC CGTGAGCCCG GAAGAGCTGA TGCTCGATCG CACTCAGCTG ATGGGGTTAA CGGCGAAAGA GATGACGGTG CTGGTTGGCG GGCTGCGTGT GTTGGGAACC AACTACGGCG GCACGAAGCA CGGCGTATTT ACCGATCGTG AAGGGGCGCT GACGAATGAT TTCTTCGCCA ACCTGACCGA CATGAAATAC ACGTGGAAGC CATACCGTAA AGACCTGTAT GAAATCCGCG ATCGTAAAAC GGGTGAAGTT AAGTGGACGG CGACGCGTCT GGATCTGGTC TTTGGGTCCA ACTCCATTCT GCGTTCTTAC GCCGAGGTTT ATGCACAGGA CGACAACAAA GAGAAGTTTG TGAATGACTT TGTTGCTGCC TGGGTGAAAG TGATGAATGC GGATCGCTTC GATCTGGCAG AGTAA
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Protein sequence | MDENKTKPAG KCPVMHGGNT ATGSSNTDWW PNALNLDILH QHDTKTNPLG SDFSYRDALK TLDVDALKKD LHALMTDSQE WWPADWGHYG GLMIRMAWHS AGTYRTADGR GGGGTGNQRF APLNSWPDNV SLDKARRLLW PIKKKYGNKL SWADLIILAG NIAYESMGLK TFGFAFGRED IWHPEKDIYW GSEKEWLAKS TGRYGSDDRT TLENPLAAVQ MGLIYVNPEG VDGNPDPLRT AQDMRVTFSR MAMNDEETVA LTAGGHTVGK THGNGDASLL GKAPEGTDVG EQGLGWHNPT GSGKGRYTVT SGLEGAWTTH PTQWDNGFFH MLLNHEWELK KSPAGAWQWE PVFIKEEDKP VDVEDPSIRY NPMMTDADMA LKVDPEYRKI SERFYQDQAY FSEVFARAWF KLTHRDMGPK TRYLGPDVPQ EDLLWQDPVP AGRTDYDVDV VKARIAESSL SISELVATAW DSARTFRGSD MRGGANGARI RLAPQKDWVG NEPERLARVL VVLENIAAAT GASVADTIVL AGNVGIEKAA KAAGVNITVP FAPGRGDTTD ALTDVESFDV LEPIHDGYRN WLKKDYAVSP EELMLDRTQL MGLTAKEMTV LVGGLRVLGT NYGGTKHGVF TDREGALTND FFANLTDMKY TWKPYRKDLY EIRDRKTGEV KWTATRLDLV FGSNSILRSY AEVYAQDDNK EKFVNDFVAA WVKVMNADRF DLAE
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