Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_2381 |
Symbol | |
ID | 8133325 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 2740566 |
End bp | 2741033 |
Gene Length | 468 bp |
Protein Length | 155 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 644865661 |
Product | 17 kDa surface antigen |
Protein accession | YP_003017948 |
Protein GI | 253688758 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3133] Outer membrane lipoprotein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00375113 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGAAGC GTTTACTTGT GGTTACCCTT GCAGGTATCA CGCTGGCTGG TTGTGCTAAT ACCAGTACGC TTTCAGGTGA TGTTTACAGT GCATCCGAAG CTAAACAGGT ACAGACCGTT ACCTACGGTA CGATTGTTTC TACGCGCCCG GTTCAGATTC AGGCGGGAGA AGATTCTAAC GTGATCGGCG CACTGGGTGG TGCCGTATTG GGTGGTTTCC TGGGTAACAC TATCGGCGGC GGTTCCGGTC GTAGTCTGGC AACAGCAGCT GGCGCAGTCG CCGGCGGTGT AGCGGGTCAA AGCGCCACAG GTGCACTGAA CCGCACGCAA GGTGTAGAAC TGGAAATTCG TCGTGATGAC GGTAGTACCA TTATGGTGGT ACAGAAACAA GGCGATACGA AATTCAGCGC AGGTCAACGC GTTGCTATGG CCAGCAATGG CCGCAGTATC ACCGTTTCTC CACGCTGA
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Protein sequence | MMKRLLVVTL AGITLAGCAN TSTLSGDVYS ASEAKQVQTV TYGTIVSTRP VQIQAGEDSN VIGALGGAVL GGFLGNTIGG GSGRSLATAA GAVAGGVAGQ SATGALNRTQ GVELEIRRDD GSTIMVVQKQ GDTKFSAGQR VAMASNGRSI TVSPR
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