| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2345 |
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| Symbol | |
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| ID | 8133289 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 2695938 |
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| End bp | 2696930 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644865626 |
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| Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
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| Protein accession | YP_003017913 |
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| Protein GI | 253688723 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG4170] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCATTAC TTGATATCCG TAACCTGACG ATTGAATTTC TCACCGCCGA CGGCGCCGTC
AAAGCCGTCG ACCGCGTCAG CATGACGCTG AGCGAAGGGG AAATTCGCGG TCTGGTGGGC
GAATCCGGCT CAGGTAAAAG CCTGATCGCC AAAGCCATCT GCGGGATCAC CAAAGAGAAC
TGGCGCGTAA CCGCCGACCG CTTCCGCTTT GATGATATCG ATCTGCTGCA ACTGTCGTCG
CGCGAGCGGC GTAAGCTGGT CGGCCATAAC GTCTCCATGA TTTTTCAGGA ACCGCAATCC
TGTCTCGATC CGTCCGAGAG TATCGGGCGG CAGTTGGTGC AGGCGATTCC TGGCTGGACG
TATAAAGGCC GCTGGTGGCA GCGATTCAAC TGGCGCAAAC GCCGCGCTAT CGAACTGCTG
CACCGCGTTG GGATTAAAGA TCATAAAGAT ATTATGGGCA GCTATCCCTA TGAGCTGAGC
GACGGCGAGT GCCAGAAAGT GATGATTGCC ATCGCGCTGG CGAACCAGCC GCGCCTGCTG
ATTGCCGATG AACCCACCAA CGCGATGGAA TCCACCACGC AGGCGCAGAT TTTCCGCCTG
CTTTCACGCC TGAATCAGAA CAATAACACC ACGATTCTGC TCATCAGCCA TGACCTGCAA
ACCATGAGCA AATGGGCTGA CCGGATCAAC GTGCTCTATT GCGGGCAAAC GGTAGAAAGC
GCGACCAGTG AAGATTTGAT CACCGCGCCG CACCACCCTT ATACGCAGGC GCTGATTCGC
GCAATGCCCG ATTTCGGTCG CTCGCTGCCG CACAAAAGCC GGCTGAACAC GCTAACCGGT
GCGATCCCCT CGCTGGAGCA CCTGCCGATT GGCTGCCGAC TCGGCCCGCG CTGCCCGTAT
TCACAAAAGC AGTGTATGCA AACGCCGCCG CTGCTTTCGG TTAAGAACCA CTTATATGCC
TGCCACTTCC CGCTCAACAT GGAGGAACCG TAA
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| Protein sequence | MPLLDIRNLT IEFLTADGAV KAVDRVSMTL SEGEIRGLVG ESGSGKSLIA KAICGITKEN
WRVTADRFRF DDIDLLQLSS RERRKLVGHN VSMIFQEPQS CLDPSESIGR QLVQAIPGWT
YKGRWWQRFN WRKRRAIELL HRVGIKDHKD IMGSYPYELS DGECQKVMIA IALANQPRLL
IADEPTNAME STTQAQIFRL LSRLNQNNNT TILLISHDLQ TMSKWADRIN VLYCGQTVES
ATSEDLITAP HHPYTQALIR AMPDFGRSLP HKSRLNTLTG AIPSLEHLPI GCRLGPRCPY
SQKQCMQTPP LLSVKNHLYA CHFPLNMEEP
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