| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2279 |
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| Symbol | |
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| ID | 8133223 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 2619863 |
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| End bp | 2620441 |
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| Gene Length | 579 bp |
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| Protein Length | 192 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 644865566 |
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| Product | Fimbrial protein |
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| Protein accession | YP_003017853 |
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| Protein GI | 253688663 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3539] P pilus assembly protein, pilin FimA |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.79512 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCGAT CTCAGGGTGT GATGGCTGGC GCGGTGCGTA CGCGAGTAAC ATGGGCCGCG
CGTTTCGGCT GGGTTTCTCT GCTCTTTATG ACGTGTTCTG TGCAGCCAGT CCGTGCCGAT
CTCGGGCTGA CCAATATGCG GCTCACGGCG ACGCTGCTGG CGAACAGCTG TAGCGTCAGC
ACAGGGACGC AGGAACAAAC GGTTGACCTC GGTACCTGGC CAAGTAAGCA GTTTGCGGTA
GGCTCGCAAA ACCCTAATCC TACGCGTTTC GAGATTGTAC TGGAGAACTG CGGCGTCGCG
GCATCTGGCG TCGAGATCAC GTTTCATGGC AGCGCGCCAG CGGGGGATAG TACGCTGCTC
GCGCTTAATG CCAGTAGCAG TGCGACGAAT GTTGCCGTGG CGATACTGGA TAGCGAACGC
CGTCGGTTGC CACTTGGTCA ACCGACCCCC GTTTATGCGC TGTCGGCAAA CGCTGCACGC
GTGCCGCTGG TGTTTTACGG GCAGTATGTT GCGATTGGTA CGCCAGTCAC GGTCGGTTCT
GCAAATGCGG ATGCAACATT TACCCTAACC TATCAGTAA
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| Protein sequence | MNRSQGVMAG AVRTRVTWAA RFGWVSLLFM TCSVQPVRAD LGLTNMRLTA TLLANSCSVS
TGTQEQTVDL GTWPSKQFAV GSQNPNPTRF EIVLENCGVA ASGVEITFHG SAPAGDSTLL
ALNASSSATN VAVAILDSER RRLPLGQPTP VYALSANAAR VPLVFYGQYV AIGTPVTVGS
ANADATFTLT YQ
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