| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2255 |
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| Symbol | |
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| ID | 8133199 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 2590023 |
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| End bp | 2590895 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644865542 |
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| Product | hypothetical protein |
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| Protein accession | YP_003017829 |
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| Protein GI | 253688639 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5006] Predicted permease, DMT superfamily |
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| TIGRFAM ID | [TIGR00950] Carboxylate/Amino Acid/Amine Transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.116056 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACACTA CATCCTCATC ACACTATTGG CGTGACGTTC TACTCACGGC GCTGGCTCCC
GCGATTTGGG GGTCTACCTA CATTGTGACA TCCGAACTCC TGCCACCAGA TCGTCCCTTC
ACGGCGGCGC TTATCCGTGT GCTGCCTGCC GGTCTATTAC TGCTTTTATT CACCCGCCGC
TTTCCTGCCC GGCAAGACTG GTGGCGCGTC GTCGTGCTCA GCGCTCTGAA TATCGGTGTT
TTTCAGGCAC TGCTGTTCGT CGCCGCTTAC CGTTTGCCTG GCGGATTGGC AGCGGTACTG
GGCGCGATCC AACCGCTGCT GGTCATGGTG TTGGTCTGGG CGGTGGATCA TCGCGCCCCC
AGACTGGCTA CGCTGTGGTC GGCGATCATC GGCGTCGGCG GCATGGCCAT TCTGCTGCTG
TCGCCGCAGA CGACCTTTGA ACCTATCGGA ATCGCCGCTG CGCTGCTGGG TGCGGTGTGT
ATGGCGACAG GAGTCTGGCT GACGCGCCGC TGGCGGCTCG ATCTGCCCGT GCTACCGCTT
ACCGGCTGGC AACTTTTCAT CGGCGGATTA ATGCTGGCGC CGGTCGCATG GCTGGTTGAT
GCGCCGCTGC CCGCGTTAAC CCTGTCGCAA TGGGCCGCCT ACGCCTATCT CTGCCTTGCG
GGTGCCGTAC TCGCTTATGG GCTCTGGTTC CGTGGCGTAT CCCGTCTGCC AACGGTTGCC
GTTGCTTCAT TAGGGCTGCT AAGTCCGCTC ACTGCCGTAG TGCTGGGTTG GGTTCTGCTT
TCGCAATCGA TGACCGGTAC GGCGTTTCTG GGTTTGGCGA TCGTGTTAGC CAGCATTTTC
GCCGTGCAAT GGACGACGGC GCGAGGTAAG TAA
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| Protein sequence | MNTTSSSHYW RDVLLTALAP AIWGSTYIVT SELLPPDRPF TAALIRVLPA GLLLLLFTRR
FPARQDWWRV VVLSALNIGV FQALLFVAAY RLPGGLAAVL GAIQPLLVMV LVWAVDHRAP
RLATLWSAII GVGGMAILLL SPQTTFEPIG IAAALLGAVC MATGVWLTRR WRLDLPVLPL
TGWQLFIGGL MLAPVAWLVD APLPALTLSQ WAAYAYLCLA GAVLAYGLWF RGVSRLPTVA
VASLGLLSPL TAVVLGWVLL SQSMTGTAFL GLAIVLASIF AVQWTTARGK
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