| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2230 |
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| Symbol | |
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| ID | 8133174 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 2561961 |
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| End bp | 2563049 |
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| Gene Length | 1089 bp |
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| Protein Length | 362 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644865518 |
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| Product | extracellular solute-binding protein family 1 |
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| Protein accession | YP_003017805 |
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| Protein GI | 253688615 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.282493 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCACAT TTAATAACAG GTTCACATTC AATAACACGC CCAAAGCAAA GGGACGTCAG
GCGCTGAAGA AAATTGCGGC CACGGCTTTT CTGGTGACGA TGGCCTGTCA AGCTCAGGCG
GAATCCGTCA CGGTAATCTC ATTCGGTGGT TTGAACAAGG ACGCGCAGGA TAAGGCATTT
TACAAACCGT TCGCCGCTGC GGGTAAAGGC ACAGTCGAAG CCGGTGAGTA CAACGGTGAA
ATGGCGCGTA TCCGGGCGAT GGTGGAAACC GGGCAGGTAG GTTGGGACGT CGTGGAAGTC
GAAGGTCCTG AGCTGATGCG TGGTTGTAAC GAGGGATTAT TTGAGCCGCT GGACTGGTCA
AAGCTGGGCG ATCAATCCCA GTTTGTCAAA GGGGCGGTCA CCGAGTGCGG CGCGGGAATT
TTCCTGTGGT CAACCGTCTT GACCTATAAC GCGCAGAAGC TGAAGCAGGC ACCGAAAAGC
TGGGCTGATT TCTGGAATGT AAAAGAATAT CCCGGCAAGC GCGCGCTGCG TAAAAGCGCC
AAATTTACGC TGGAAATCGC GCTGTTGGCT GATGGCGTGA AACGTGACGA TCTTTATAAG
GTGCTGGCGA CGCCAGAGGG CGTCGATCGT GCCTTTAAGA AACTGGATCA GATCAAATCC
AATATTCAGT GGTGGGAATC TGGTGCCCAG CCGCTGCAAT GGCTGGTGTC GGGCGATGTG
GTGATGACGT CCGCGTATAA CGGTCGCGTC TCAGCGGCGC AGAAAGAAGG GCATGATTTC
AAGATTGTCT GGGCCGACAG CATTTACGAT CTGGATAGTT GGGCAATCGT CAAAGGCTCC
AAGCATAAGG CGCTGGCGGA GCAGTTCATT GCGTTTGCCA ACCAACCGGA AAACCAGAAA
GTATTCGCCG AGAACATTCC CTATGGCCCG ACGCACGTCA AAACCACCAG TCTGCTAACG
CCAGCCGTCG CCGCCAATCT GCCGACTGCG CCGGATAATT TGGCACAGGC CTTGCAGGTA
GATACAGAGT TTTGGATCGA CCACGGTGAA GAGCTGGAGC AACGTTTTAA CGCCTGGGCC
GCGCAGTAA
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| Protein sequence | MFTFNNRFTF NNTPKAKGRQ ALKKIAATAF LVTMACQAQA ESVTVISFGG LNKDAQDKAF
YKPFAAAGKG TVEAGEYNGE MARIRAMVET GQVGWDVVEV EGPELMRGCN EGLFEPLDWS
KLGDQSQFVK GAVTECGAGI FLWSTVLTYN AQKLKQAPKS WADFWNVKEY PGKRALRKSA
KFTLEIALLA DGVKRDDLYK VLATPEGVDR AFKKLDQIKS NIQWWESGAQ PLQWLVSGDV
VMTSAYNGRV SAAQKEGHDF KIVWADSIYD LDSWAIVKGS KHKALAEQFI AFANQPENQK
VFAENIPYGP THVKTTSLLT PAVAANLPTA PDNLAQALQV DTEFWIDHGE ELEQRFNAWA
AQ
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