| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2157 |
|---|
| Symbol | |
|---|
| ID | 8133101 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012917 |
|---|
| Strand | - |
|---|
| Start bp | 2464240 |
|---|
| End bp | 2464938 |
|---|
| Gene Length | 699 bp |
|---|
| Protein Length | 232 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 644865445 |
|---|
| Product | urea ABC transporter, ATP-binding protein UrtE |
|---|
| Protein accession | YP_003017732 |
|---|
| Protein GI | 253688542 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
|---|
| TIGRFAM ID | [TIGR03410] urea ABC transporter, ATP-binding protein UrtE |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.360084 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTAGAGA TTTCAGAACT GAATCAATAT TATGGCGGTA GTCACATTCT GCGCGGTTTA
TCTTTTGAGG TAAATCCCGG CGAAATTACC TGCCTGTTAG GGCGCAATGG CGTGGGGAAA
ACCACGCTGC TGAAATGTTT GATGGGGCTG ATTCCGGCGA AGTCTGGCAC GATTCGCTGG
CAGGGCGAAG CGATCAATAC GCGCAAGCCC TATCAGCGTG TGCAGTCTGG CATTGCCTAT
GTGCCGCAGG GGCGAGAGAT TTTTCCTCGC CTGACGGTAG AAGAAAATCT ACTGATGGGA
CTGTCGCGCT TTCCTGGCAA ACAGGCGAGG CAAGTGCCGG ATGAGATCTA TCAGCTTTTC
CCGGTGTTGG ATGAAATGAA GCAGCGACGC GGCGGCGATT TGTCCGGAGG GCAACAGCAA
CAGCTGGCGA TCGGGCGGGC GCTGGCCTGT AAACCACAGT TGCTGATTCT GGATGAGCCG
ACAGAAGGCA TACAGCCGTC GGTGATCAAA GAGATTGGCG CGGTGATTCG CCAACTGGCG
CAGCGTGGCG ATATGGCGAT TCTGCTGGTT GAGCAGTTTT ACGACTTCGC CGCCGAACTG
GCAGACAGCT ATCTGGTGAT GTCACGCGGG GAAATCATAC AGCGTGGGCG AGGTGAAACG
ATGGAGCAGG ACGGCGTACG GGGACTGGTC GCGATTTGA
|
|---|
| Protein sequence | MLEISELNQY YGGSHILRGL SFEVNPGEIT CLLGRNGVGK TTLLKCLMGL IPAKSGTIRW
QGEAINTRKP YQRVQSGIAY VPQGREIFPR LTVEENLLMG LSRFPGKQAR QVPDEIYQLF
PVLDEMKQRR GGDLSGGQQQ QLAIGRALAC KPQLLILDEP TEGIQPSVIK EIGAVIRQLA
QRGDMAILLV EQFYDFAAEL ADSYLVMSRG EIIQRGRGET MEQDGVRGLV AI
|
|---|
| |