| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2117 |
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| Symbol | ipk |
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| ID | 8133061 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 2421577 |
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| End bp | 2422449 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644865406 |
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| Product | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase |
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| Protein accession | YP_003017693 |
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| Protein GI | 253688503 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1947] 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase |
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| TIGRFAM ID | [TIGR00154] 4-diphosphocytidyl-2C-methyl-D-erythritol kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.825247 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAACCGA CGGTTATCGA GACATGGCCA GCACCCGCCA AACTGAATTT GTTTCTCTAT
ATTACTGGTC AGAGACAGGA CGGGTATCAC CTGCTGCAAA CGCTATTCCA ATTTCTGGAT
TACGGTGACA CCCTGACGAT TCAGCCACGT GATGACGACC AGATTAACCT GCTGACCCCC
GTGGACGGCG TAGAGAACGA GCAAAACCTG ATCGTCCGCG CCGCACGCTT ATTACAGCAG
CACTGTAAAC GTCATAATAT TCACCCTGCC CAGTTCGGTG CAGATATCCG TATCGATAAA
TATCTGCCCA TGGGCGGCGG GCTGGGCGGT GGTTCATCCA ATGCAGCTAC CGTTTTGGTC
GCTCTTAATC ATTTATGGAA AAGCGGGCTG AGCGTTGATA CGTTGGCCGA TCTGGGGTTG
CAATTAGGTG CGGATGTTCC CGTCTTTGTT CGTGGGCATG CCGCCTTTGC CGAAGGCATT
GGTGAGCGGT TAACACCAGC AAATCCGCCA GAGAAATGGT ATCTGGTGGC TCACCCTGGC
GTGAGTATCG CTACCCCGCT GATTTTCGGC GATCCGGAGT TGACGCGTAA TTCACCAGTT
CGTGATTTAG AAACTTTATT AAACCAGACC TTCGTCAATG ATTGTGAAGC TATCGCAAGA
AAACGTTTTC GTGAGGTTGA ACAGCTACTT TCATGGCTGC TAGAATATGC CCCGGCGCGC
CTGACTGGAA CGGGAGCTTG TGTGTTTGCA GAGTTTGACA CCGAGTTCGC AGCCCGTCAG
GTGCTTGACC AGGCCCCGGA ATGGCTAAAC GGTTTCGTCG CGCGAGGCGT TAACGTCTCT
CCGCTACAAC GTACGCTTTC CGGGCAACTT TAG
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| Protein sequence | MQPTVIETWP APAKLNLFLY ITGQRQDGYH LLQTLFQFLD YGDTLTIQPR DDDQINLLTP
VDGVENEQNL IVRAARLLQQ HCKRHNIHPA QFGADIRIDK YLPMGGGLGG GSSNAATVLV
ALNHLWKSGL SVDTLADLGL QLGADVPVFV RGHAAFAEGI GERLTPANPP EKWYLVAHPG
VSIATPLIFG DPELTRNSPV RDLETLLNQT FVNDCEAIAR KRFREVEQLL SWLLEYAPAR
LTGTGACVFA EFDTEFAARQ VLDQAPEWLN GFVARGVNVS PLQRTLSGQL
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