Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_2111 |
Symbol | |
ID | 8133055 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 2416281 |
End bp | 2417090 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 644865400 |
Product | putative transcriptional regulator |
Protein accession | YP_003017687 |
Protein GI | 253688497 |
COG category | [S] Function unknown |
COG ID | [COG2912] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.201208 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTGCTA TTGCTGATTT TGAATTCAAC CAGTCGCTGC TAAGTGATGG TGTCGTGTTG GTTTCACAGG CTATTCGCCG CGACTTTCCC GCTCAGGATG TGCGGCAAAA TCTGCAACAG ATGGTTGAGA GCGCTCGATC CGCTATTCCT GAAGATCTTG AGCAAGATCT TCAGCTTGAA AAGCTGATTG AGCTGTTTTA TCACACCTGG GGATTCGGCG GTGCGGGCGG CGTTTATCGC CTGTCTGATG CACTGTGGCT CGATCAGGTA CTTGAATCGC GTCAGGGCAT GCCCGTGTCA CTTGGCGTTA TCTTCCTGCA TATCGCCAAT GAACTGGGTT TGCCGCTGAT GCCAGTCATT TTCCCAACAC AGCTGATTCT GCGTGCCGAC TGGCTCGACG AAGAGATGTG GCTGATCAAC CCATTAAACG GCGATACGCT GAGCGAACAT GTGTTGGAAG TCTGGCTGAA AGGTAACATC GGTCCATCAA CCCGCCTGCT GGATGAAGAT CTGGATGAAG CGGAAAACGT CCTGATTGTG CGTAAGATGC TCGATACGTT GAAAGTTGCA CTGATGGAAG AAAAACAGAT GGAGCTGGCG TTAAGAGCCA GCGAAGCGGT GTTGCAATTT GACCCGGACG ATCCGTATGA AATTCGCGAT CGCGGCCTGA TTTATGCGCA ACTGGATTGC GACCACATTG CGCTTTCCGA TCTCAACTAT TTTGTTGAAC AGTGTCCGGA AGATCCAGTG AGTGAAATGA TAAAAGTGCA GATTCACTCG ATAGAGCAGA AACAGATTGT CTTGCATTAA
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Protein sequence | MSAIADFEFN QSLLSDGVVL VSQAIRRDFP AQDVRQNLQQ MVESARSAIP EDLEQDLQLE KLIELFYHTW GFGGAGGVYR LSDALWLDQV LESRQGMPVS LGVIFLHIAN ELGLPLMPVI FPTQLILRAD WLDEEMWLIN PLNGDTLSEH VLEVWLKGNI GPSTRLLDED LDEAENVLIV RKMLDTLKVA LMEEKQMELA LRASEAVLQF DPDDPYEIRD RGLIYAQLDC DHIALSDLNY FVEQCPEDPV SEMIKVQIHS IEQKQIVLH
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