| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2097 |
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| Symbol | |
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| ID | 8133041 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 2400118 |
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| End bp | 2400834 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644865386 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003017673 |
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| Protein GI | 253688483 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.434652 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCGCG TGTTGATTAC CGGTGCCAGC TCTGGAATCG GTCAGCAACT GGCACTGGAT
TATGCCCGAG ACGGCTGGGA CGTCCTCGCC TGCGGGCGTG ACGAACAACG GCTCCATGCG
TTGACTGTCG CCTTTCCAGC CATTCGTACA ATCGCATTTG ATATGACGAA CCTGGCTGAG
ACGCAGCAGG CATTAGGCGG TGTTACCGCC GATCTAGTGA TTCTCTGCGC GGGGACCTGT
GAATATCTGG ATAACGGCGT CGTTGAAGCA GAAAAAGTCA GTCGGGTGCT AACAACCAAC
GTAATCGGCC CGGTGAATTG TCTGTCGGTA CTATTGCCAC AGCTTGCGAA CGGTAGCCAT
CTGGCGTTGG TGGGATCGAC CGCCAGCCTT GTTGCACTGC CAAGAGCAGA AGCCTATGGC
GCGTCAAAAG CGGCACTGGC CTATTTTGCC CGCAGTCTGT CGCTGGATTT GCAAACGCGT
GATATCACCG TGTCGCTGAT CCTGCCCGGT TTTGTCGATA CGCCACTGAC TGCACGCAAT
GACTTCCCGA TGCCGATGCT GATTTCTGTG TCACACGCTG CGGAGGCAAT TCGTCGCGGG
CTGGCAAAGA GAAAACGCGA GATCGCCTTC CCTCTGCGCT TTGCGCTGTT GCTCAAATGC
GTTTCTGTGC TTCCACAATC GTGGCAACGT TTCCTCACCA GCCGGTTAGT AAGGTAA
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| Protein sequence | MKRVLITGAS SGIGQQLALD YARDGWDVLA CGRDEQRLHA LTVAFPAIRT IAFDMTNLAE
TQQALGGVTA DLVILCAGTC EYLDNGVVEA EKVSRVLTTN VIGPVNCLSV LLPQLANGSH
LALVGSTASL VALPRAEAYG ASKAALAYFA RSLSLDLQTR DITVSLILPG FVDTPLTARN
DFPMPMLISV SHAAEAIRRG LAKRKREIAF PLRFALLLKC VSVLPQSWQR FLTSRLVR
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