| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2060 |
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| Symbol | |
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| ID | 8133004 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 2365440 |
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| End bp | 2366822 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644865350 |
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| Product | diaminobutyrate--2-oxoglutarate aminotransferase |
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| Protein accession | YP_003017637 |
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| Protein GI | 253688447 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0160] 4-aminobutyrate aminotransferase and related aminotransferases |
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| TIGRFAM ID | [TIGR00709] 2,4-diaminobutyrate 4-transaminases |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00222981 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGGATA AAGTCCGTAT TGACAGTTTA GGTGCGAATT CATTAACCGG AAACAATGAA
ACCTATTTGG CAAGACAAGC TGAATTTGAA TCGAACGTGA GGAGTTATCC ACGCAAATTG
CCTCTGGCAA TTGCGAAAGC TGAAGGCGTG TGGATCACTG ATGTTGAGAA TAATCAATAT
CTTGATTGTC TGGCGGGTGC GGGTACGCTC GCGCTGGGGC ACAACCATCC TGACGTGCTG
CAAAGCATCC AAAGTGTCAT TACTAGCGGC TTGCCGTTAC ATACACTTGA TCTGACAACG
CCGTTGAAAG ATCAGTTCTC CGAATACCTG CTTTCCTTAT TGCCTGGCCA AGGCAAAGAG
TACTGCCTCC AGTTTACGGG CCCGTCTGGC GCCGATGCGG TTGAAGCCGC GCTGAAACTG
GCAAAAAAAT ACACTGGCCG TTCTGGTGTG ATCAGCTTCT CCGGCGGCTA TCACGGCATG
ACGCATGGCG CGCTGTCCGT AACCGGTAAC CTGTCTCCGA AAGAAGCCGT CGACGGCATG
ATGCCTGAAG TCCAGTTTAT GCCTTACCCG CATCAATACC GCTGCCCGCT GGGCATTGGC
GGTGAAGCTG GCGTTAAAGC ATTAACCTAC TATTTCGAAA ACCTGATCAA CGACGTTGAG
AGTGGCGTAC GCAAACCGGC GGCTGTCATT CTGGAAGCCG TTCAGGGTGA AGGCGGCGTT
AACCCGGCAC CTGCCGAGTG GTTACAGCGC ATCCGTAAAG TGACGCAGGA ACACGGTATT
CTTCTGATCA TCGACGAAGT TCAGGCTGGT TTTGCTCGTA CCGGTAAATT CTTCGCCTTT
GAACACGCCG GCATTGAGCC CGATATCATC GTGATGTCCA AAGCCGTTGG TGGCGGTTTG
CCATTAGCCG TATTGGGTAT CAAGAAGCAG TTCGATGCCT GGGCACCGGG TCACCACACG
GGGACTTTCC GCGGTAACCA ACTGGCGATG GCAACCGGCC TGACGACGCT GAAGCACCTG
AAAGATAATC AGGTGGCAAA CAAAGTCGCC GAGCAAGGTG AATGGCTGAA AGCCAAACTG
GCTGAGCTGC AAAAACGCTA TCCGGTGATC GGTCACATTC GCGGTCTGGG ATTAATGATC
GGGATTGAGA TTGTTAAACC TGGCGAAGCG CAGGATCACA TGGGTTGCTA TCCGGCTGAC
GGCGAGCTGT CTGCCCTGTT GCAGAAAAAA TGCTTTGAAT CAGGCCTGAT TCTGGAGCGC
GGTGGCCGTA ACGGTTGCGT TCTGCGTCTG CTGCCTTCCC TGCTGATCAG CAATGCTGAA
TTGGAAATCT TCCTGGATAA ATTTGAAAAC GCCCTGCTGT CTGCTGGCGT GAAGCCAGTC
TGA
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| Protein sequence | MTDKVRIDSL GANSLTGNNE TYLARQAEFE SNVRSYPRKL PLAIAKAEGV WITDVENNQY
LDCLAGAGTL ALGHNHPDVL QSIQSVITSG LPLHTLDLTT PLKDQFSEYL LSLLPGQGKE
YCLQFTGPSG ADAVEAALKL AKKYTGRSGV ISFSGGYHGM THGALSVTGN LSPKEAVDGM
MPEVQFMPYP HQYRCPLGIG GEAGVKALTY YFENLINDVE SGVRKPAAVI LEAVQGEGGV
NPAPAEWLQR IRKVTQEHGI LLIIDEVQAG FARTGKFFAF EHAGIEPDII VMSKAVGGGL
PLAVLGIKKQ FDAWAPGHHT GTFRGNQLAM ATGLTTLKHL KDNQVANKVA EQGEWLKAKL
AELQKRYPVI GHIRGLGLMI GIEIVKPGEA QDHMGCYPAD GELSALLQKK CFESGLILER
GGRNGCVLRL LPSLLISNAE LEIFLDKFEN ALLSAGVKPV
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