Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_2045 |
Symbol | |
ID | 8132989 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 2350180 |
End bp | 2350845 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 644865335 |
Product | putative dithiobiotin synthetase |
Protein accession | YP_003017622 |
Protein GI | 253688432 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0132] Dethiobiotin synthetase |
TIGRFAM ID | [TIGR00347] dethiobiotin synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.154785 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTGAAAC GTATTTTTGT CACTGGTACT GATACCGCCG TTGGCAAAAC AGTGGTATCC AAGGCGCTAC TGCAAAAACT AGCGCTGGCA GGCAAATCGG TTGCGGGCTA CAAACCGATA GCGAAAGGGT GCGAAGAGAC GGAAGCGGGC CTGCGTAATA AAGATGCACT GCTGCTACAG GCGGCTTCCA CACTGGAATT GCCCTATAAC ATGGTTAACC CCATCGCTCT GCGAGAGGAT GAAATCAGCG CCAGTGAAGG AACGATTGAT TACTGCACGA TGACGCAGGG TTTGCGCCAC ATGAGCGAGG CGGCGGATAT CGTGGTGGTC GAAGGCACGG GCGGATGGCG AACTGTCATG AACGATCTGC GTCCGTATTC CGAATGGGTC GTACAGGAAC AACTGCCCGT TGTGCTGGTT GTTGGCATCA AACTGGGCTG TATCAGCCAT GCGTTGCTGA CGGCGCAGGC AATCATCAAC GATGGTTTGC CGCTGGTTGG CTGGGTTGCT AACCGTATTA ACCCCGGTCT GGCGAATTAC GCCGAAATCA TTCACGTTCT GCGGAAAAAA ATTCCGGCAC CGCAACTGGG CGAGCTGCCT TACTTACCGC GTGCCGAACA GCGGGATCTC TCGCCTTATA TCGATCTTTC TGCCGTCAGC AATTAA
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Protein sequence | MLKRIFVTGT DTAVGKTVVS KALLQKLALA GKSVAGYKPI AKGCEETEAG LRNKDALLLQ AASTLELPYN MVNPIALRED EISASEGTID YCTMTQGLRH MSEAADIVVV EGTGGWRTVM NDLRPYSEWV VQEQLPVVLV VGIKLGCISH ALLTAQAIIN DGLPLVGWVA NRINPGLANY AEIIHVLRKK IPAPQLGELP YLPRAEQRDL SPYIDLSAVS N
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