Gene PC1_2044 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_2044 
Symbol 
ID8132988 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp2348829 
End bp2350046 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content53% 
IMG OID644865334 
ProductROK family protein 
Protein accessionYP_003017621 
Protein GI253688431 
COG category[G] Carbohydrate transport and metabolism
[K] Transcription 
COG ID[COG1940] Transcriptional regulator/sugar kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.463852 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATATCCG ACGGTCAACC AGGACACATC GATCAAATCA AACAAATGAA TGCCGGGGCG 
GTGTATCGGC TGATCGATAA GTACGGCCCG ATATCACGTA TCGAACTGTC CAAACGCGCT
CAGCTCGCGC CCGCCAGTAT TACCAAAATC GTCCGCGAAC TGCTGGAAGC CCATCTGGTG
CAGGAAACCG AATACCAGGA TGTGGGTAGC AGGGGGCGTC CTGCTATCGG TCTGATCCTG
GATACCGAAG CCTGGCACTA TCTTTCCGCC CGCATCAGCC ACAATAGTAT TTCCCTGGCG
TTGCGCGATC TCAGCAGCAA GCTGGTTGTA GAAGAAGATA TCCCGCTTCC CGCAGAAGCG
CCGCAACCGC TGCTTGATCG TATTTTGAAT GAAATCGACC AGTTTTTTAT TCGTCACCAG
AAACGGCTGG AGCGATTAAC CGCAATCGCG ATTACCGCGC CGGGTATGAT TGACGCCAAC
AAGGGCGTTA TTCACCGCAT GCCGTTCTAT GACGTTGAGG AAATGGCGAT TGGCCCGGCG
CTGGAACAGC GTACAGGGCT ACCCGTGTAT TTGCAGCACG ATATTTGTGC CTGGACGATG
GCCGAAGCGT TATACGGCGC GGCGCGCGAT TGTCAAAATG TCATTCAGGT GGTAATCGAC
CATAACGTCG GCGCGGGCGT GATTACTGGC GGACGCATCC TGCACGCGAG AAGCCGAAAT
CTGGTTGAAA TCGGGCACAC CCAGGTCGAT CCCTATGGTA AACGTTGCTA TTGCGGCAAT
CACGGCTGTC TGGAAACGGT CGCCAGCACG GAAAATATGC TGGAGTTAGC GCAGCAGCGC
ATGAATACAT CCATGAGTTC GCTCCTGCAT GGTTCACCGC TTAACGTTGA GAACCTGTGT
GATGCGGCGC TCAAAGGCGA TCAATTAGCC AAAGATATCA TCAACGATGT CGGGAATAAT
GTCGGCCGAA TTGTTGCCAT CATGGTGAAT CTCTTCAACC CCGATAAAAT TCTGGTGGGT
TCCCCCCTGA ATAAAGCGGC CAGCATTTTG CACCCCGCCA TTTTAGGCTG CATTCAACAG
CAGTCATTCC CGCCCTATAG CCATAACATT CAGGTAGAAG CGACCCAGTT CTACAATCAG
GGGACAATGC CCGGTGCGGC ATTGGTAAAA GACGCTCTCT ATAACGGATC GCTGCTGGTT
AAACTACTTC AGGGATAA
 
Protein sequence
MISDGQPGHI DQIKQMNAGA VYRLIDKYGP ISRIELSKRA QLAPASITKI VRELLEAHLV 
QETEYQDVGS RGRPAIGLIL DTEAWHYLSA RISHNSISLA LRDLSSKLVV EEDIPLPAEA
PQPLLDRILN EIDQFFIRHQ KRLERLTAIA ITAPGMIDAN KGVIHRMPFY DVEEMAIGPA
LEQRTGLPVY LQHDICAWTM AEALYGAARD CQNVIQVVID HNVGAGVITG GRILHARSRN
LVEIGHTQVD PYGKRCYCGN HGCLETVAST ENMLELAQQR MNTSMSSLLH GSPLNVENLC
DAALKGDQLA KDIINDVGNN VGRIVAIMVN LFNPDKILVG SPLNKAASIL HPAILGCIQQ
QSFPPYSHNI QVEATQFYNQ GTMPGAALVK DALYNGSLLV KLLQG