| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2033 |
|---|
| Symbol | |
|---|
| ID | 8132977 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012917 |
|---|
| Strand | + |
|---|
| Start bp | 2335552 |
|---|
| End bp | 2336598 |
|---|
| Gene Length | 1047 bp |
|---|
| Protein Length | 348 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 644865323 |
|---|
| Product | putative oxidoreductase |
|---|
| Protein accession | YP_003017610 |
|---|
| Protein GI | 253688420 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0673] Predicted dehydrogenases and related proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGAGA CCGTTCGTGT TGGGTTGCTG GGCTACGGTT ATGCCAGTAA GACATTCCAC
GCGCCGTTGA TTGCAGGTAC GGCTGGTATG GAACTGGTCG CGGTATCCAG CAGTAGTGCT
GAAAAAGTGC ATGCGGATTG GGCAAATCTG CGAGTAGAGA AAGACCCTCA GGCGTTGTTT
AACGATCCCG ATATTGACCT CATTGTTATT CCTACCCCCA ATGACACGCA CTTCCCGCTG
GCAAAACAGG CGCTGGAAGC GGGTAAGCAT GTCGTCGTCG ATAAACCTTT CACCGTGACG
TTGTCACAAG CATACGACTT AGGCGCGATT GCCGAACACG TCGGAAAAGT GCTTTCTGTG
TTCCATAACC GCCGCTGGGA CAGCGATTTT CTGACGCTGA AACAGCTGCT GTCAGCGGGA
ACGTTAGGAA ATGTGGTGTA TATGGAATCG CATTTCGATC GCTTCCGTCC TGAAGTGCGT
CAGCGCTGGC GTGAAGATGG CAGCGAAGGC AGTGGGATTT GGTACGATCT GGGGCCGCAC
TTGCTGGATC AGGCATTAGA GCTGTTTGGT TTGCCGGTCG CGATTCAGGT GGACATGGCG
CAACTGAGAC CGGGGAGTAA GGCAACGGAT TATTTCCATG CGACGCTGAT TTACCCGCAG
CGCCGGGTGG TCCTGCACGC CAGTATGCTG GTGGCCGCGG CTTCTGCACG CTATACCGTG
CACGGCACGC GTGGCAGTTT CGTCAAATAC GGGCTCGACC CGCAGGAAGA TCGCCTGAAA
GCGGGCGAAC GTCCACCGTT AGCCGACTGG GGACAGGATA AGCACGATGG TGTGCTGACG
TTGTCTCGCG ATGGCATAAC GGCAGAGCAA ACGATCGCCA CGATTCCAGG TAACTATCCC
GCTTACTATG CGGCGGTGCG CGATGCGCTG CTCGGTAAAG GGGAAAACCC CGTCAGCGTG
CATCAGGCGA TTCAGGTGAT GGAGTTGATC GAGTTGGGAC TGCTTTCCCA TGAGCAGAAA
AAAGCCGTCA CGCTGAAAAA TAGCTAG
|
|---|
| Protein sequence | MSETVRVGLL GYGYASKTFH APLIAGTAGM ELVAVSSSSA EKVHADWANL RVEKDPQALF
NDPDIDLIVI PTPNDTHFPL AKQALEAGKH VVVDKPFTVT LSQAYDLGAI AEHVGKVLSV
FHNRRWDSDF LTLKQLLSAG TLGNVVYMES HFDRFRPEVR QRWREDGSEG SGIWYDLGPH
LLDQALELFG LPVAIQVDMA QLRPGSKATD YFHATLIYPQ RRVVLHASML VAAASARYTV
HGTRGSFVKY GLDPQEDRLK AGERPPLADW GQDKHDGVLT LSRDGITAEQ TIATIPGNYP
AYYAAVRDAL LGKGENPVSV HQAIQVMELI ELGLLSHEQK KAVTLKNS
|
|---|
| |